Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0043 |
Symbol | |
ID | 4282268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 54585 |
End bp | 55301 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136947 |
Product | hypothetical protein |
Protein accession | YP_752773 |
Protein GI | 114565619 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000138345 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTGGG TGGTAGGCGT CCGCTTTAAA CCAGCGGGTA AAATATACCA TTTTGCTTGT GAAGGCCATG ATTTGGAAGA AGGAGACCCG GTAATTGTTG AAACTGTACG GGGTGTGGAG TATGGTATTG TAGCCGTGGG AAAACGAGAT CTGGATGGAG AAAAGCTTAT ACAACCTTTA AGAAATGTAA TCCGTAAAGC TAAACCTGAG GACAGCAAAA CCTGGGAAAA GAATCAGCAA AAGGGCAGGG AGGCTTTGGA TATATGTAAG CAAAAAATCA AAGAACACCA GCTGCCTATG CGCTTAATCG ATGTTGAATA CACCTTTGAC CTGGGTAAGA TAATTTTTTA TTTTACCGCT GAAGGGCGGG TGGATTTTCG TGAACTGGTG AAAGACCTGG CCGCTATATT CAAGACCCGG ATTGAACTGA GGCAAATCGG AGTAAGAGAC GAAGCCAAGA TGCTGGGAGG GATTGGTGCC TGTGGCAGGA TACTTTGCTG TAAGTCCTTT TTAGGGGAAT TCCAACCCGT TTCCATACGC ATGGCCAAAG AACAGAATTT GTCACTTAAT CCCACCAAGA TTTCAGGAAT ATGCGGGCGT TTAATGTGTT GCTTGAAATA TGAATCAGAG CTCTATGATA CCGCAACAAA TGGGGAGAAC CAGCATGGAA AAAACAGTTC AAGAGCTAAA AATAATAATT CGGGAACTGA TTCTTGA
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Protein sequence | MVWVVGVRFK PAGKIYHFAC EGHDLEEGDP VIVETVRGVE YGIVAVGKRD LDGEKLIQPL RNVIRKAKPE DSKTWEKNQQ KGREALDICK QKIKEHQLPM RLIDVEYTFD LGKIIFYFTA EGRVDFRELV KDLAAIFKTR IELRQIGVRD EAKMLGGIGA CGRILCCKSF LGEFQPVSIR MAKEQNLSLN PTKISGICGR LMCCLKYESE LYDTATNGEN QHGKNSSRAK NNNSGTDS
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