Gene Swol_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0043 
Symbol 
ID4282268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp54585 
End bp55301 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID638136947 
Producthypothetical protein 
Protein accessionYP_752773 
Protein GI114565619 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000138345 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTGGG TGGTAGGCGT CCGCTTTAAA CCAGCGGGTA AAATATACCA TTTTGCTTGT 
GAAGGCCATG ATTTGGAAGA AGGAGACCCG GTAATTGTTG AAACTGTACG GGGTGTGGAG
TATGGTATTG TAGCCGTGGG AAAACGAGAT CTGGATGGAG AAAAGCTTAT ACAACCTTTA
AGAAATGTAA TCCGTAAAGC TAAACCTGAG GACAGCAAAA CCTGGGAAAA GAATCAGCAA
AAGGGCAGGG AGGCTTTGGA TATATGTAAG CAAAAAATCA AAGAACACCA GCTGCCTATG
CGCTTAATCG ATGTTGAATA CACCTTTGAC CTGGGTAAGA TAATTTTTTA TTTTACCGCT
GAAGGGCGGG TGGATTTTCG TGAACTGGTG AAAGACCTGG CCGCTATATT CAAGACCCGG
ATTGAACTGA GGCAAATCGG AGTAAGAGAC GAAGCCAAGA TGCTGGGAGG GATTGGTGCC
TGTGGCAGGA TACTTTGCTG TAAGTCCTTT TTAGGGGAAT TCCAACCCGT TTCCATACGC
ATGGCCAAAG AACAGAATTT GTCACTTAAT CCCACCAAGA TTTCAGGAAT ATGCGGGCGT
TTAATGTGTT GCTTGAAATA TGAATCAGAG CTCTATGATA CCGCAACAAA TGGGGAGAAC
CAGCATGGAA AAAACAGTTC AAGAGCTAAA AATAATAATT CGGGAACTGA TTCTTGA
 
Protein sequence
MVWVVGVRFK PAGKIYHFAC EGHDLEEGDP VIVETVRGVE YGIVAVGKRD LDGEKLIQPL 
RNVIRKAKPE DSKTWEKNQQ KGREALDICK QKIKEHQLPM RLIDVEYTFD LGKIIFYFTA
EGRVDFRELV KDLAAIFKTR IELRQIGVRD EAKMLGGIGA CGRILCCKSF LGEFQPVSIR
MAKEQNLSLN PTKISGICGR LMCCLKYESE LYDTATNGEN QHGKNSSRAK NNNSGTDS