| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0013 |
|---|
| Symbol | |
|---|
| ID | 4281350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 18168 |
|---|
| End bp | 18623 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638136908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_752743 |
|---|
| Protein GI | 114565589 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000252281 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCATG AGGATTTCAT GCGCCACGCG CTCGAAGAGG CCCGGGAGGC TTATAAGAGG
GGAGAAATCC CGGTAGGAGC AATCGTGGTG CATAATGGAA AAATAATTGC CCGGGCTCAT
AATGAAAAGG AATCCTACCA GGATGCCACA GCGCATGCCG AGATGTTAGC CTTGCAGAGG
GCTGCCCGGC ACCTGGGACA CTGGCGTTTA AATGAGTCCG TATTATATTG TACTCTGGAA
CCCTGTGTCA TGTGCGCCGG AGCGATGGTC AATGTTCGCC TGGGTCATCT GGTTTACGGG
GTAACAGATC CGAAGGCAGG TTCAGCCGGT TCTATCTATG ATATTGTGAG GTCCCCCGCC
TTAAACCACC AGGTGGTAGT AGAAGGGGGA GTTTTAAAAG AGGAGTGCAG CGAGCTCCTG
AAAAGATTTT TTGCCAGTCT ACGGAGAGAT GGCTGA
|
|---|
| Protein sequence | MQHEDFMRHA LEEAREAYKR GEIPVGAIVV HNGKIIARAH NEKESYQDAT AHAEMLALQR
AARHLGHWRL NESVLYCTLE PCVMCAGAMV NVRLGHLVYG VTDPKAGSAG SIYDIVRSPA
LNHQVVVEGG VLKEECSELL KRFFASLRRD G
|
|---|
| |