| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0009 |
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| Symbol | |
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| ID | 4281309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 11004 |
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| End bp | 12596 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638136900 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_752739 |
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| Protein GI | 114565585 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases
[COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0352108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA AAAAGGTTAT AGTCAGTGAG CGCATAGCCG ATGAAGGCAT TGAACTGCTG
AAGACTGAAC TGGAGGTAGA CTACCGGGAT GGGATTTCCC GCGAAGAATT ACTGGAGATT
ATTGATCAGT ATGATGCTTT GATCGTAAGA AGTGTCACCC AGGTTGACGA AGAATTGATA
AGGCGGGCTA AACGACTCAA GATAGTTGGC CGTGCCGGCA ACGGAATAGA CAACATTGAT
GTAGATGTCT GTACCCGTTA TGGGGTAATA GTAGCTAACA CCCCGGATAG TAACACCATT
TCTGCGGCGG AACAAACCAT AAGCCTCTTG TTATCCTCCA TTCGTAATAC GGCCTGGGCT
AGCGAGTATC TCAAAGGGGG AACCTGGGAC CGGAAACCCT TCCGGGGGGT GGAACTCTAT
GGCAAAACAG TTGGAATTGT AGGTCTGGGA AGGATTGGCT CCATGGTGGC TACCCGCTTA
AAGGCCTTTA ACATGAGAGT TATTGCCTAT GATCCGTATA TATCCGATGA ACGCTTTACC
CGCTTCGGAG CGGAAAAGAT GGAGAGCCTG GAAGAGCTGG TTAAAGAGGC CGATTTTATT
ACCGTGCATA CCCCGCGAAA CGAAGAAACC ATGCACATGA TTGATGAAAG AATACTGGGT
CTGGCCAAAG AGGGAGTGCG GGTAGTCAAT TGTGCCCGGG GTGGCATCAT CAAGGAAGAA
GCCCTATTAA AAGGATTGGA GTCCAAAAAG GTATTGAGTG CCGGTCTGGA TGTATTTGAA
AAAGAACCGG CCATTGACAA CCCGTTGTTC CAGTTCAAGA GCGTGGTGGT AACACCCCAT
TTAGGTGCGG ACACCTTTGA AGCCCAGAAG CGGGTGGGAG AAAACATTGC TGAGCAGGTC
ATTAAAGCTC TGAAAGGCGA GATAGTGCCC AACCTGGTAA ACTTGCCGGC CATGTTGAAA
GACGAGCTGG AATACCTCAA ACCCTATATT ACTTTGGCGG AAAAGCTGGG CAATATCTAT
TATCAGATGG AAAAATCAGC GGTCAGCCGG GTGGAGTTAA CCTATAGTGG TCCCATCAGC
AGTAATGAGA CCGAAATTTT AACGGTAGCT TTTCTTAAGG GCCTGCTGGA GCCGGTCATG
GGGGATAAGG TCAGCTATGT TAACGCCCGC TTAATGGCGG AAGACCGGGG AATCAAGGTC
TTTGACCATA AGGAAGAACA GAGTCCTAAA AGATATAAAA ACCTTATCAC AGCCCGCGTA
TTCGACCATG AGCGCGAACT GGCTATAGAG GGAACCCTTT CTCGGGCGAG ATTTCCGCTC
CTGGTAGAAA TCAACGGCTA TGAAACCGAG AGCAACCTGG AAGGATACCT GCTGGTAGTG
GAAAATGAAG ATAGGCCCCG AGTAATTGGA CCTTTCGCTA CAGCCCTGGG AGATGAAGGC
ATAAATATTG CCGGGATGAA GGTGGCGCGC AAGACCAAAG GGGAAAAGGC CATAATGATA
ATCAATGTGG ATAATAAAGT GGAAGAGCCG GTTCTGGAGA AATTAAGCCA GCTGGATGGT
ATAGTCGGAA AACCTATACT GCTGCAACTG TAA
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| Protein sequence | MERKKVIVSE RIADEGIELL KTELEVDYRD GISREELLEI IDQYDALIVR SVTQVDEELI
RRAKRLKIVG RAGNGIDNID VDVCTRYGVI VANTPDSNTI SAAEQTISLL LSSIRNTAWA
SEYLKGGTWD RKPFRGVELY GKTVGIVGLG RIGSMVATRL KAFNMRVIAY DPYISDERFT
RFGAEKMESL EELVKEADFI TVHTPRNEET MHMIDERILG LAKEGVRVVN CARGGIIKEE
ALLKGLESKK VLSAGLDVFE KEPAIDNPLF QFKSVVVTPH LGADTFEAQK RVGENIAEQV
IKALKGEIVP NLVNLPAMLK DELEYLKPYI TLAEKLGNIY YQMEKSAVSR VELTYSGPIS
SNETEILTVA FLKGLLEPVM GDKVSYVNAR LMAEDRGIKV FDHKEEQSPK RYKNLITARV
FDHERELAIE GTLSRARFPL LVEINGYETE SNLEGYLLVV ENEDRPRVIG PFATALGDEG
INIAGMKVAR KTKGEKAIMI INVDNKVEEP VLEKLSQLDG IVGKPILLQL
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