Gene Swol_0005 details

Gene Information

• Locus tag: Swol_0005
• ID: 4281305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 4057
• End bp: 5958
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638136896
• Product: DNA topoisomerase (ATP-hydrolyzing)
• Protein accession: YP_752735
• Protein GI: 114565581
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTAGAAA GAGAATACAA TGCCTCTGAT ATCCAGGTAT TGGAAGGCCT AGAGGCAGTG 
CGTAAAAGAC CGGGGATGTA TATTGGTTCA ACCGGGCCTA AAGGTTTACA TCACCTGGTT 
TTTGAAATAG TGGACAATAG TATAGACGAA GCCGTAGCCG GATTCTGTAA AAAGATAGAA 
GTAACTATTA ATCAGGACAA TAGTATTACG GTTTGTGATG ATGGTCGCGG TATTCCGGTG 
GACATTCACC CTGCTATGGG AATTCCCGCG CTGCAAGTTA TTTTAACTAC CCTTCATTCC 
GGGGGAAAGT TCGGCGGTAG CGGTTATAAT ATTTCCGGGG GCTTGCATGG AGTGGGATTA 
TCGGTAGTAA ATGCTCTTTC CCGGCGAATG GAAGTCCGGG TAAAAAGGGA TGGGCATATA 
TACCAGCAGG ATTATGAACG GGGAAACCCG GTGAATGAGA TAAGGATAAT AGGCGAGAGT 
AAAGAAACCG GAACAAGTAT TTGTTTTTTT GCGGATGATG AAATATTTGA AGAAATAAAT 
TTTGAAAGAG AAATCCTCTT GCAAAGATTG CGGGAATTAT CTTTTCTCAA CCGGAATCTA 
AAAATATCGC TGCGCGATGA GAGAGAAGAA GAAGTTTTTT ACCAGGAATT TCACTATTCC 
CATGGTCTTA AAGATTTTGT GGCTTATATT AATAAAAATA AAGAGGTTAT TAATGATAAC 
CCCATCTATT TTGAAAACAA GAAAGATGAT GTTATCGTAC AGGTGGCAAT TCAATACAAT 
AACAGCTATA GCGAAAACCT TTATTCTTTT GCCAATAATA TCCGTACCCA GGAAGGCGGT 
ACCCATGAAA TAGGCTTTAA AAATGCCTTA ACCCGGGTGA TTAATGATTA TGCCAAGAAA 
AATAATATAC TTAAAGAAAA TGATAATAAT TTATCCGGCG AAGATATCCG CGAGGGAATA 
GCCGCAATTA TATCGGTTCT GGTAAAAGAC CCTCAATTTG AAGGACAGAC CAAAACCAAG 
CTGGGCAATA CCTATATTCG AGGAATAGTT GAAAGCATAG TCTTTGAACA TGTGGAAGAC 
TATCTTAACG AAAACCCGGC GGCAGCACGC AAATTGCTGG ATAAGGCCAT TTCCGCCCGT 
CGGGCCCGGG AAGCGGCTAA AAAAGCCCGG GAACTGACCC GGCGGAAAAA TGCCCTGGAG 
TCAACGGCCC TCCCTGGCAA GCTGGCCGAT TGCAGCAACA AAAATCCGGC TGAATCAGAG 
TTGTTCATTG TGGAGGGAGA CTCGGCCGGA GGATCGGCTA AACAAGGAAG GGATCGCACC 
TACCAGGCTA TATTGCCCTT GCGAGGAAAA ATACTAAATG TGGAAAAAGC GCGCCTGGAT 
AGGGTACTAT CCAGTGAAGA AATTAGAAAC CTTATTACCG CCATGGGTAC AGGAATAGGC 
GAAGACTTTG ATATCAAGAA AGCTCGCTAC CACAAGCTTT TTATTATGAC CGATGCTGAT 
GTTGACGGAT CTCACATCCG GGTTTTATTA CTTACCTTCT TTTATCGATA TATGAAAGAG 
TTAATAGAAG AAGGATACCT TTATATAGCC CAACCCCCCC TCTATGGCCT GAAAAGAGGA 
AAAGAGATTA AATATTTCTA CAATGATGCT GATTTGAATG CCTTCCTCAG CCAGACGGAA 
CAGAAGTGGT CTATTCAAAG ATATAAAGGC CTGGGGGAAA TGGATCCGGA ACAATTGTGG 
ACAACTACTA TGGACGCAGA AAGCAGAACC GTATTAAAGG TAACCATAGA AGACGCGATA 
AAAGCCAATG ATATCTTTTC GGCCTTGATG GGGGATAATG TACAGCCACG GCGTGAATTT 
ATTGAGAGCA ATGCCAGGTA TGTAGCTAAT CTGGATATTT AG 

 

Protein sequence

MLEREYNASD IQVLEGLEAV RKRPGMYIGS TGPKGLHHLV FEIVDNSIDE AVAGFCKKIE 
VTINQDNSIT VCDDGRGIPV DIHPAMGIPA LQVILTTLHS GGKFGGSGYN ISGGLHGVGL 
SVVNALSRRM EVRVKRDGHI YQQDYERGNP VNEIRIIGES KETGTSICFF ADDEIFEEIN 
FEREILLQRL RELSFLNRNL KISLRDEREE EVFYQEFHYS HGLKDFVAYI NKNKEVINDN 
PIYFENKKDD VIVQVAIQYN NSYSENLYSF ANNIRTQEGG THEIGFKNAL TRVINDYAKK 
NNILKENDNN LSGEDIREGI AAIISVLVKD PQFEGQTKTK LGNTYIRGIV ESIVFEHVED 
YLNENPAAAR KLLDKAISAR RAREAAKKAR ELTRRKNALE STALPGKLAD CSNKNPAESE 
LFIVEGDSAG GSAKQGRDRT YQAILPLRGK ILNVEKARLD RVLSSEEIRN LITAMGTGIG 
EDFDIKKARY HKLFIMTDAD VDGSHIRVLL LTFFYRYMKE LIEEGYLYIA QPPLYGLKRG 
KEIKYFYNDA DLNAFLSQTE QKWSIQRYKG LGEMDPEQLW TTTMDAESRT VLKVTIEDAI 
KANDIFSALM GDNVQPRREF IESNARYVAN LDI