Gene Swol_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0003 
Symbol 
ID4281696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2699 
End bp3796 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content35% 
IMG OID638136894 
ProductDNA repair and genetic recombination protein 
Protein accessionYP_752733 
Protein GI114565579 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATCC TTAAGTTTCA AATAAAAGAT TTTCGTAATT TAAAAAAGAT TGAATACCAA 
CCTTCACCGG GTTTAAATAT ATTCTATGGG GAAAATGCTC AGGGTAAAAC CAATATTTTA
GAAGCTTTAT ACTACTTGGC CACGGGTAAT TCTTTTCGCA GCAATAAAGA AAAAACTTTA
ATCAGCTATG AAAGCTCAAG CCTTCAGGTT CAAGCTCGCT ATAATCACCA GGAGAGAATA
ATTGATTCTA GTATCACTTA TGGGCTGGAT GGTAAGGTGT TTAGAATCAA TAAGAAAAGA
GCCAGCTATA ATCATACCGA CCGTTTGCGA ATAATCCTTT TTAGCCCGGA TGATCTGTAT
TTGGTTAAAG GAGCCCCTTA TAAGCGTCGG TTTTTTTTAG ATTTCCTTTT GGGACAGATA
TCTAATGAAT ATTTATTTAA ACTAGATAAT TATAGAAAAA TTCTGAAAAA AAGGAATTTA
TTATTAAAAA AAGAAGAAAC TAATAGCAGA AGTTTTGCTA TAATTAATGA TATTTTTATG
GATTTAGCAG CCCAACTACT TATATCAAGA TTGAATCTGA TTAATGTTCT CGATGAAGCC
ATACAGGAGA TTTACCCACA GATTAACAAT GATGGCGGGC AGTTAAAAAT ACGCTATGCT
CTTTCTTTTC CTGTTGATAG TGGTAAAATT AATCTGGATA TACTAAAGGA CAGCTTAAAG
AAGCAAGTGG AAAGTGAAAC AGAAAAGGAA AAGAAAAGAA AAACCACTCT GCTGGGTCCG
CATCTGGATG ACATGCATAT TTATCTAAAT GAACAGATGG CTCGCTTATT TGCCTCTCAG
GGCCAGCAAA GAAATATAGT TATTTGTTTG AAACTGGCAG AAATAATGAC TTTTAGAAAG
ATAAAAGGGT TTTTCCCCAT TTTTCTATTG GATGAGGTAC TAGCCGAACT GGACGACAGT
AGAAGCAATA AATTGTTAAA ATATCTGGCA CAGTCCCCTT TTCAGAGTTT TCTTACCTCA
GTAAAGTTGG AAAAATTTGA GGTAATGGAT GCTTCGATTT TCCTGGTTAA GGATGGCTGT
TTGCTAGGAA AGGAGTAG
 
Protein sequence
MKILKFQIKD FRNLKKIEYQ PSPGLNIFYG ENAQGKTNIL EALYYLATGN SFRSNKEKTL 
ISYESSSLQV QARYNHQERI IDSSITYGLD GKVFRINKKR ASYNHTDRLR IILFSPDDLY
LVKGAPYKRR FFLDFLLGQI SNEYLFKLDN YRKILKKRNL LLKKEETNSR SFAIINDIFM
DLAAQLLISR LNLINVLDEA IQEIYPQINN DGGQLKIRYA LSFPVDSGKI NLDILKDSLK
KQVESETEKE KKRKTTLLGP HLDDMHIYLN EQMARLFASQ GQQRNIVICL KLAEIMTFRK
IKGFFPIFLL DEVLAELDDS RSNKLLKYLA QSPFQSFLTS VKLEKFEVMD ASIFLVKDGC
LLGKE