| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4060 |
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| Symbol | |
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| ID | 4280951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4839489 |
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| End bp | 4840355 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136885 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_752724 |
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| Protein GI | 114565210 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.833958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGT GGGAAGGCAT TTTTGAATTT GTGGCGGTGG CCGAAACGGA CAGTTTTACT
GTGGCTGGCA AGCGTTTGAG TATTTCTACC GCGCAAGTGA GTCGACAAAT TAGTCAGCTT
GAAAACCGTT TAAACACCAA ATTATTTTAT CGCACCACTC GTAAAGTATC GTTAACCGAA
GAAGGTACGG TCTATTATCA GCATTGTCGC CAGGTATTAA ACAGTCTTGA TGAAGCAGAA
CGCGCTATTT CAAGTTTAAA AGATAAGCCA CAAGGACTTA TTAGAATTAC TGCACCAGTG
ACTTACGGTG AAAAGTTTAT CATGCCGATA GTGATTGATT TTATGCAGCA ATATCCTGAC
ATTGAAGTGA TTTGTGAGCT GACTAATCAG CAACTTGACT TAGTGGATGG TGGTTATGAT
TTGGCGATTA GGTTAGGGCG GTTAACTAAT TCTACTATGA TGGCAAAGCG GCTTACGAGT
CGAAGCCAAT ATGTGTGCGC AGCCCCGAGT TATATCGCTA AATACGGTAC GCCTTATGCG
TTATCGGAGT TAAGTCAGCA TAATTGTTTA ATCGGCAGTC AGTCACATTG GCATTTTGTT
GAGCAAGGTA AACCTAAGAC GGTAAAAGTG CATGGGTCTT TAGCTTGTAG CAGTGGTTTG
AGTTTATTGA ATGCAGCTAT ATGTGGTTTG GGGATTGTGC AGTTACCAGG ATATTACGTC
AATGATGCTA TAGCAGAGGG GCTGTTAGTG GTATTGCTTG CTCCTTTTCA ACAACCTAAA
GAAGGTATTT GGGCTTTGTA TCCGCATAAT CGCCATTTAT CACCCAAAGT CAGATTGCTG
GTCGATAAGT TATCGCAAGA GTTGTAA
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| Protein sequence | MMKWEGIFEF VAVAETDSFT VAGKRLSIST AQVSRQISQL ENRLNTKLFY RTTRKVSLTE
EGTVYYQHCR QVLNSLDEAE RAISSLKDKP QGLIRITAPV TYGEKFIMPI VIDFMQQYPD
IEVICELTNQ QLDLVDGGYD LAIRLGRLTN STMMAKRLTS RSQYVCAAPS YIAKYGTPYA
LSELSQHNCL IGSQSHWHFV EQGKPKTVKV HGSLACSSGL SLLNAAICGL GIVQLPGYYV
NDAIAEGLLV VLLAPFQQPK EGIWALYPHN RHLSPKVRLL VDKLSQEL
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