Gene Sfri_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_4059 
Symbol 
ID4280950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4838217 
End bp4839347 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content44% 
IMG OID638136884 
Productalcohol dehydrogenase 
Protein accessionYP_752723 
Protein GI114565209 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAC AATTTATTAA ATCAAAAGCC GCTATTGCTT GGGGACCTGG CCAGCCACTA 
TCGGTAGAAG AAGTCGACGT CATGTACCCA AAAGCGGGTG AAGTCATGGT GCGTATTGTG
GCATCTGGCG TTTGTCATAC CGATGCTTTC ACGCTTTCAG GTGATGATCC TGAAGGGGTA
TTCCCGGCGA TTCTTGGTCA TGAAGGTGGT GGTATTGTTC ACATGGTCGG TGAAGGTGTT
ACTAGCGTAC AAGTCGGCGA TCATGTTATT CCGTTATACA CAGCAGAATG TGGAGTATGT
AAATTCTGTA CTTCTGGTAA AACTAATCTT TGCAGTGCAG TACGTGAAAC TCAAGGCAAA
GGGTTAATGC CAGACGGCAC CACGCGTTTC TTTAAAGATG GTGAGCCAAT TTTTCACTAC
ATGGGCTGTT CAACATTTTC TGAGTACACC GTATTACCGG AAATATCATT AGCCAAAGTC
AGTAAAGATG CGCCATTAGA AGAAGTCTGT TTATTAGGTT GTGGTGTGAC CACCGGCATG
GGCGCTGTAT TGAAAACAGC TAAAGTTCAA AAAGGTGATA CTGTCGCTAT TTTTGGTTTA
GGCGGTATCG GTCTATCAGC AATTATTGGT GCCACCATGG CTGGCGCCAG CCGAATTATT
GGTATTGACC TTAATGAATC TAAATTCGAA CTTGCCAAAA AATTAGGTGC AACCGACTGC
ATTAACCCTA AAAACTTTGA TAAGCCGATT CAAGAAGTGA TTGTAGAAAT GACCGATGGT
GGTGTCGATT TCTCATTTGA ATGTATTGGT AACGTCAATG TAATGCGCAG TGCATTAGAA
TGCTGTCATA AAGGTTGGGG CGAGTCAGTC ATTATTGGTG TAGCAGGTGC TGGACAAGAA
ATTTCAACCC GTCCATTTCA GTTAGTTACT GGTCGAGTAT GGCGCGGCAG TGCATTTGGT
GGCGTTAAAG GACGCAGTGA ATTACCGGGC ATTGTTGAGC AATACCTAGC TGGCGAATTT
AAACTTGACC ACTTTATTAC TCACACCATG GGTATTGAAG GCATTAACGA TGCATTTGAT
TTAATGCACA AAGGTGAAAG TATACGCAGC GTGATCCACT TTGCCAAGTA A
 
Protein sequence
MSAQFIKSKA AIAWGPGQPL SVEEVDVMYP KAGEVMVRIV ASGVCHTDAF TLSGDDPEGV 
FPAILGHEGG GIVHMVGEGV TSVQVGDHVI PLYTAECGVC KFCTSGKTNL CSAVRETQGK
GLMPDGTTRF FKDGEPIFHY MGCSTFSEYT VLPEISLAKV SKDAPLEEVC LLGCGVTTGM
GAVLKTAKVQ KGDTVAIFGL GGIGLSAIIG ATMAGASRII GIDLNESKFE LAKKLGATDC
INPKNFDKPI QEVIVEMTDG GVDFSFECIG NVNVMRSALE CCHKGWGESV IIGVAGAGQE
ISTRPFQLVT GRVWRGSAFG GVKGRSELPG IVEQYLAGEF KLDHFITHTM GIEGINDAFD
LMHKGESIRS VIHFAK