Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_4059 |
Symbol | |
ID | 4280950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4838217 |
End bp | 4839347 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136884 |
Product | alcohol dehydrogenase |
Protein accession | YP_752723 |
Protein GI | 114565209 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAC AATTTATTAA ATCAAAAGCC GCTATTGCTT GGGGACCTGG CCAGCCACTA TCGGTAGAAG AAGTCGACGT CATGTACCCA AAAGCGGGTG AAGTCATGGT GCGTATTGTG GCATCTGGCG TTTGTCATAC CGATGCTTTC ACGCTTTCAG GTGATGATCC TGAAGGGGTA TTCCCGGCGA TTCTTGGTCA TGAAGGTGGT GGTATTGTTC ACATGGTCGG TGAAGGTGTT ACTAGCGTAC AAGTCGGCGA TCATGTTATT CCGTTATACA CAGCAGAATG TGGAGTATGT AAATTCTGTA CTTCTGGTAA AACTAATCTT TGCAGTGCAG TACGTGAAAC TCAAGGCAAA GGGTTAATGC CAGACGGCAC CACGCGTTTC TTTAAAGATG GTGAGCCAAT TTTTCACTAC ATGGGCTGTT CAACATTTTC TGAGTACACC GTATTACCGG AAATATCATT AGCCAAAGTC AGTAAAGATG CGCCATTAGA AGAAGTCTGT TTATTAGGTT GTGGTGTGAC CACCGGCATG GGCGCTGTAT TGAAAACAGC TAAAGTTCAA AAAGGTGATA CTGTCGCTAT TTTTGGTTTA GGCGGTATCG GTCTATCAGC AATTATTGGT GCCACCATGG CTGGCGCCAG CCGAATTATT GGTATTGACC TTAATGAATC TAAATTCGAA CTTGCCAAAA AATTAGGTGC AACCGACTGC ATTAACCCTA AAAACTTTGA TAAGCCGATT CAAGAAGTGA TTGTAGAAAT GACCGATGGT GGTGTCGATT TCTCATTTGA ATGTATTGGT AACGTCAATG TAATGCGCAG TGCATTAGAA TGCTGTCATA AAGGTTGGGG CGAGTCAGTC ATTATTGGTG TAGCAGGTGC TGGACAAGAA ATTTCAACCC GTCCATTTCA GTTAGTTACT GGTCGAGTAT GGCGCGGCAG TGCATTTGGT GGCGTTAAAG GACGCAGTGA ATTACCGGGC ATTGTTGAGC AATACCTAGC TGGCGAATTT AAACTTGACC ACTTTATTAC TCACACCATG GGTATTGAAG GCATTAACGA TGCATTTGAT TTAATGCACA AAGGTGAAAG TATACGCAGC GTGATCCACT TTGCCAAGTA A
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Protein sequence | MSAQFIKSKA AIAWGPGQPL SVEEVDVMYP KAGEVMVRIV ASGVCHTDAF TLSGDDPEGV FPAILGHEGG GIVHMVGEGV TSVQVGDHVI PLYTAECGVC KFCTSGKTNL CSAVRETQGK GLMPDGTTRF FKDGEPIFHY MGCSTFSEYT VLPEISLAKV SKDAPLEEVC LLGCGVTTGM GAVLKTAKVQ KGDTVAIFGL GGIGLSAIIG ATMAGASRII GIDLNESKFE LAKKLGATDC INPKNFDKPI QEVIVEMTDG GVDFSFECIG NVNVMRSALE CCHKGWGESV IIGVAGAGQE ISTRPFQLVT GRVWRGSAFG GVKGRSELPG IVEQYLAGEF KLDHFITHTM GIEGINDAFD LMHKGESIRS VIHFAK
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