| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4051 |
|---|
| Symbol | |
|---|
| ID | 4280942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4830322 |
|---|
| End bp | 4831116 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638136876 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_752715 |
|---|
| Protein GI | 114565201 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAA CTGGTGAAGA AATGACACAG CAGAGCTATA TCCAACATCA CCTTACCAAT
TTAACCGTTG GTGAAGGATT TTGGACTTGG AACATTGATT CGTTGCTCTT TTCGGTTGGG
CTTGGAATGT TGTTCTTATG GCTGTTTTAC CGTGCCGGCA AAAAAGCGAC CACAGGCGTT
CCTGGCAAAT TTCAATGTTT TGTCGAGATC ATTGTTGAGT TCGTTGATAG CAGTGTGAAA
GAAACTTTTC ACGGCCGCAA TCCTGTTATT GCGCCTTTAG CTCTGACAAT TTTCGTCTGG
ATTTTCATGA TGAACTTCAT GGATATGATC CCAGTCGATT GGTTACCTTC ATTGGCTTTA
TTAGCTGGTG TTCCATACCT AAAAGTTGTT CCGACTACAG ACGTTAACAT TACCTTCAGC
TTAGCTCTTG GTGTGTTTGT GCTGATTATT TATTACAGCA TTAAAGTCAA AGGTGTTTCA
GGTTTTGTTA AAGAACTAAC ATTTCAGCCT TTTAACCATT GGGCAATGAT ACCCGTCAAC
TTATTATTAG AAACAGTAAC TCTAGTTGCG AAGCCGATTT CATTGGCTCT TCGACTATTT
GGTAACTTGT ACGCTGGTGA GTTGATATTT ATCCTTATTG CATTGATGTA CGGTTCTAAC
GTGGCGTTAT CTGCTCTAGG TGTAGGATTA CAACTAGGTT GGTTAATTTT CCATATTTTA
GTTATTACTT TACAAGCATT TATTTTCATG ATGTTGACCA TTGTTTATTT AAGCATGGCG
CATGAAGATC ATTAA
|
|---|
| Protein sequence | MSATGEEMTQ QSYIQHHLTN LTVGEGFWTW NIDSLLFSVG LGMLFLWLFY RAGKKATTGV
PGKFQCFVEI IVEFVDSSVK ETFHGRNPVI APLALTIFVW IFMMNFMDMI PVDWLPSLAL
LAGVPYLKVV PTTDVNITFS LALGVFVLII YYSIKVKGVS GFVKELTFQP FNHWAMIPVN
LLLETVTLVA KPISLALRLF GNLYAGELIF ILIALMYGSN VALSALGVGL QLGWLIFHIL
VITLQAFIFM MLTIVYLSMA HEDH
|
|---|
| |