Gene Sfri_4036 details

Gene Information

• Locus tag: Sfri_4036
• ID: 4280927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 4813681
• End bp: 4814346
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638136861
• Product: histidine kinase
• Protein accession: YP_752700
• Protein GI: 114565186
• COG category: [R] General function prediction only
• COG ID: [COG3897] Predicted methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCTC TACGCTTAAG CTACCAAACA GTTGAATTTG GTGACATAGA TGTTCATCTA 
TGTACTTTAC GTAATAATCA AGAATTTTAT GACCCTACAG GCATAGCTGA AAAACTCGGA 
ATATCCTCTG CGAGCTGGCC TATTTTTGGC ATTGTATGGC CATCAAGTTT AGTGCTGGCT 
AACTATATGT TGGATTACAA AACCGAAGGT AAAAGAATTC TAGAAATAGG CTGTGGAATA 
GCGCTATCAA GCTTACTTCT TAACGAAAAA CATGCCGATA TAACCGCAAC CGACTATCAC 
CCAGAAGTTG AGCAGTTCCT TAATCGAAAC ACAAAACTCA ACAATGGTAA AAACATTGCT 
TTTGAGCGAG TAGATTGGGC CAATGATACC AGCAAGCTGG GACTCTTTGA TGTCATCATC 
GGCAGTGATT TATTGTACGA AGATGAGCAT GTGCAGTTAT TGGCTTATTT TATTAAAAAC 
CATGCCAGTG AAAAATGTGA CGTCATTATC GTAGACCCAG GCCGAGGCCG AAAAAATAAA 
CTCAGTGTAA AATTAGCAGA GTTCGGTTTT ATCAGCAGCC ATTTTAAACC AATACACACC 
GACTATTTAG CACTGCCCTT TAAAGGCTAC ATTCTGGTTT TTTCGCGTGG TAATGTCATT 
GCCTAA 

 

Protein sequence

MTALRLSYQT VEFGDIDVHL CTLRNNQEFY DPTGIAEKLG ISSASWPIFG IVWPSSLVLA 
NYMLDYKTEG KRILEIGCGI ALSSLLLNEK HADITATDYH PEVEQFLNRN TKLNNGKNIA 
FERVDWANDT SKLGLFDVII GSDLLYEDEH VQLLAYFIKN HASEKCDVII VDPGRGRKNK 
LSVKLAEFGF ISSHFKPIHT DYLALPFKGY ILVFSRGNVI A