| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4024 |
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| Symbol | |
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| ID | 4280915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4796429 |
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| End bp | 4796884 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638136845 |
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| Product | transcriptional regulator, BadM/Rrf2 family protein |
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| Protein accession | YP_752688 |
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| Protein GI | 114565174 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.89096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTAA CCCGATATAC AGATTTTGGT ATTCGCATTT TGATGTATCT TGCAGTGCAA
TCTGAACGCG AAAATTTATT TCGAATAGCT GAAGTCACCA GTGTTTTTGA CCTTTCTTCA
AACCACGTAG CCAAGATTAT CCATCAATTG GGTAAAATGG GATATTTGCA AACTGTCAGA
GGTAAAAGCG GTGGTTTTAG ATTGGCAAAA GCTGCTGATG AGGTGTTAAT TGGACAATTG
GTCCGTGATT TAGAGCATTC ATTATCTCCT ATTGATTGTG AATCTCCTTA TTGCCGATTT
ACGCCAATAT GCCGATTAAA AGGCGTGTTG GGTCAGGCTG TTACGGCTTA TCTTGCTGTG
CTTGATCAAT ATACTTTAGC TGATATTGTA TCCAATAAGT CTGATATTTT ATCTACACTA
CCAGACTTAT CTATTTCAGT GTTGCAGTTG GATTAG
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| Protein sequence | MQLTRYTDFG IRILMYLAVQ SERENLFRIA EVTSVFDLSS NHVAKIIHQL GKMGYLQTVR
GKSGGFRLAK AADEVLIGQL VRDLEHSLSP IDCESPYCRF TPICRLKGVL GQAVTAYLAV
LDQYTLADIV SNKSDILSTL PDLSISVLQL D
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