Gene Sfri_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_4020 
Symbol 
ID4280911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4792133 
End bp4792567 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content38% 
IMG OID638136841 
Productrhodanese domain-containing protein 
Protein accessionYP_752684 
Protein GI114565170 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAT ATATGGAATT TTTTAAAGCG AACCCAATGT TAAGCTTAGC GTGGGTCGGC 
TTGTTTGTAG CACTTGTTGT TAGTGTCATT AAATCTGGTA CATCAAAAGT GAAGAATGTC
AGTCATCAAG AGCTAACACT CATGGTGAAT AAGCAAGATG CCAAACTCGT TGATGTGCGT
GGCAAAGAAG AATTTAAGAA AGGCCATATT GTTGATTCAC TCAATGTGAC CTTATCAGAA
ATTAAAAATA ATCAAGTCAC TAGCCTTGAA AAGTTTAAAA CCAGCCCCAT TATATTAGTA
TGTAACTCAG GTATGACATC AGGCCAAGCA GCTCAACTTC TTACTAAACA AGGATTTGAA
AACGTGTTTA ACCTTAAAGG TGGCATGGGC GAATGGCAAG GTGCTAATTT ACCAGTCGTT
AAAAGCAAGC GTTAA
 
Protein sequence
MQEYMEFFKA NPMLSLAWVG LFVALVVSVI KSGTSKVKNV SHQELTLMVN KQDAKLVDVR 
GKEEFKKGHI VDSLNVTLSE IKNNQVTSLE KFKTSPIILV CNSGMTSGQA AQLLTKQGFE
NVFNLKGGMG EWQGANLPVV KSKR