Gene Sfri_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_4009 
Symbol 
ID4280900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4780587 
End bp4781123 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content40% 
IMG OID638136830 
Producthypothetical protein 
Protein accessionYP_752673 
Protein GI114565159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.898368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACT CAAATTTAAG TCGACAGTTA CTGTATTCAT TATTGGTCGT GGGAGCTATT 
TTGCTTCCGC GAGTCTCTAT GGCGCAGAAC GCATTCGAGT TAAAAGCGGC ATTAACCTAT 
AACTTTGCTA AGTTTACTCA GTGGCCTGAA GCGCGTCTTA ATACCTCATC TGCATGGAAA 
ATATGTTTTT TCGGAAATCA ATATCACGAC AGTTTCATGG GACTTTCCGA TAAAACGCTG 
GGAACTCAGT CTGTGATGGC CATTGAGTTA TCTGGAATAA GCCAAATCGA TCAGTGCGAT 
GTTGTATTTG TAGACACTAA CTCTAGGGAG TTAACCCATA GATTGTTAGT GGCTGTCGAT 
AATAAGGCTA TTTTAACGGT TTCGGATATC ACAGGTTTTG CAATGCAAGG CGGGATGATT 
GAAATCGTCG AGCAAGATAA GCGATTGTAT TTTAAAGTTA ATATGCAAGT GGTAGCAAAA 
TCTGGATTAA CTATCAGCTC TCAAGTATTG AAATTGGCAC TTGAGGTTAA GCGATGA
 
Protein sequence
MKNSNLSRQL LYSLLVVGAI LLPRVSMAQN AFELKAALTY NFAKFTQWPE ARLNTSSAWK 
ICFFGNQYHD SFMGLSDKTL GTQSVMAIEL SGISQIDQCD VVFVDTNSRE LTHRLLVAVD 
NKAILTVSDI TGFAMQGGMI EIVEQDKRLY FKVNMQVVAK SGLTISSQVL KLALEVKR