Gene Sfri_4007 details

Gene Information

• Locus tag: Sfri_4007
• ID: 4280898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 4777643
• End bp: 4778182
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638136828
• Product: hypothetical protein
• Protein accession: YP_752671
• Protein GI: 114565157

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CTAATTTGAG TCGACAGATA CTGTATTCAT TATTGGTTGT ATTTGTGCTG 
CTTCCGCGTT CATCTATGGC TATGTCCCAG GACTCGTTTG ATTTAAAAGC GGCGTTTACC 
TATAACTTCG CGAAATTTAC CCAGTGGCCA GAATCGCGAC TTAATACACC ATCTGCGTGG 
AAAATATGTT TCTTTGGAAA TCAATATCGC GATAGTTTTA TGGGGCTTGC GAAGAAAAAA 
TTGGTGACTC AATCAATCAC GGCTATTCAG CTATCAGAAA CAAGTCAAAT CGAACAGTGT 
GATGTGGTAT TTATCGATGC TAACTCTAGG GATTTAACTC GTCGTTTGTT TTTGGCTGTC 
GATAATAAAC CTATTTTAAC GGTTTCAGAT ATCTCGGGAT TTGCGGTGCA AGGAGGCATG 
ATTGAAATCG TTGAAAAAGA TAAACGATTG TTTTTCAATA TTAATATTAA AGTGTTAGAG 
GCTTCAGGGT TGGATATCAG TTCACAAGTA TTGAAATTGG CACTTGAGGT TAAACGATGA 

 

Protein sequence

MKKANLSRQI LYSLLVVFVL LPRSSMAMSQ DSFDLKAAFT YNFAKFTQWP ESRLNTPSAW 
KICFFGNQYR DSFMGLAKKK LVTQSITAIQ LSETSQIEQC DVVFIDANSR DLTRRLFLAV 
DNKPILTVSD ISGFAVQGGM IEIVEKDKRL FFNINIKVLE ASGLDISSQV LKLALEVKR