| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4006 |
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| Symbol | |
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| ID | 4280897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4775298 |
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| End bp | 4777646 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136827 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_752670 |
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| Protein GI | 114565156 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TGAATTTAGC ATCAATTCGA ACAAAATTGA TTTTTTCAAT GCTAGCGATC
GCTATTCTTG TCATTGTCAT TATCTCTGCA TCATTAATCA CTAAGCAATA TGCAGTGACT
AAAGAGAAAG CTGAACAAGG TTTAGCGGTG CTAAGTGATA TTGTGGCGAG CAATAGTCTG
TCAGCGGTTA TTTTTAATGA TCCATCGTCA GCCGAAAAGA CCTTATCCGC GCTCATTGCT
CAGCCAGATA TCATCCACGC GACTATTTAT GATCCTACAG GTAATCCATT TGCCGCTTAC
CAAGGTCATG GGGTTTATCA AGGCGTTATT GATCAGCAGG AATTATTGAA TATTATTTCT
TCCAAGAAAA AGCTGACGCA ATTTAACAAT GATGGAGTGC ACTCATATAC CCCTTTGCTT
TTTGAAGGTG AGGTGGTGGG CTTGTTACAT ATTACGGATA ATATGAACGC ACTCACTAAG
CAACTGGATG ATTATTTAGT GTTGGTTACT TCAGCCAGCA TATTGGCTTT TACGGCGAGT
TTATTGGTGA TGTTTTGGTT GCAATCTTTA TTCACCAAAC CACTTAATAC GCTTTTGGAA
GTTATAGAAC ATATCTCAAA TAAAAAAGAC TATACGCAAC GAGTCAACCT TAAATCGAAT
GATGAATTTT CTCAGCTGGC GCACAGCTTT AATGTGATGA TCGGCGAGGT TGATGCCCGA
GGCAGGCAAT TAGAAACGAT TAATCATGAA CTCGAAAATC GTGTTTCAGA GCGCACGTTT
GAACTGCAAC AAACCCTTGA AATTGCCAAA AAAGCCAGTC AGGCAAAGTC TGAGTTTTTA
GCGGTGATGA GTCATGAGAT TAGAACGCCA CTGAATGGTA TTGTTGGTTT TTCTGATTTA
CTGACTTCTT TTAAATTAAA TAAAGAAGTG TCTAACACGG TACAGATGAT CAACGAGTCT
GCGCAAACAT TATTGGTGTT GCTGAATGAA GTGCTGGATT TCTCGAAAGC CGATGCCAAT
AAAATGGATT TAGACATCAA AACTTTTAAT TTACCTGATC TTGTCACCTC CACATGTCAT
TCACATAAAG TGTCGGCAGG GAAAAAGGGT CTGGATTTTG AGGTGGTCAT ATCGCCATTG
AGCCACGAAA ATTACTTGGG TGACGCTGTC AGAGTACGAC AAATTATTAA TAACTTTGTC
TCAAACGCGA TAAAATTTAC CCGCCAAGGT GCTATTTCTA TAGCGGTGAG TGAGCACATG
GAGGCGTCTG ATACTTATAT TACTTTTACC GTTAAAGATA CCGGTATTGG CATTGCGGCA
TCAAAATTAG AGAGCATTTT CACCCCGTTT ATGCAAGCTG ATAGTACGAT TACCCGTGAG
TTTGGTGGAA CGGGTTTAGG TTTGGCTATT TGCCAACAGT TAGTCGTATT GATGAATGGC
CGTTATGGTG TTGAAAGTAC GTTAGACGAA GGCAGTCATT TTTGGTTTAG CATTCCCCTT
GTGCCACAAG ACAACTCAAT ATCAACAGCT ACTGTAGACG TTGAGCCAGA TGATCATGTT
CAGGCAGTGT TCCGACAATC TATAGTGTTA GTTGCAGAAG ATAATGTGGT CAATCAGTTG
GTGGTAAAAA GCTTGTTAGA GTCTTTAGGG CATCAATGTG AAATTGTAAA TAATGGTCAA
GAAGCCATCG CCAGAGCCAG CGAGAAAAAG TTTGATCTCA TCTTTATGGA TTACCATATG
CCGGTAGTTG ATGGGATCGT TGCAACTCAA GCGATAACTG ACTTAGGTCA GAGTTGCATT
AATTATGAAA CCCCTATCAT CGCACTTACT GCCGATATTC AACCGAATGT TAAAAGGCTA
TTCCGTAACG CAGGCGCTAA AGATACGCTG TTAAAACCTT TTACTCGTCA GAATCTATCA
GAATGCATGA ATAGATGGGT TTTTGAGTCT GAGAGTCCTG TTGCCGTGGT CGAGGAAGTT
CAGAGCGAGG AATCGTTAGT ATTTGTTGAT GGGCCCCTTG ATGATATTCA ACAAATTTCG
CCTGATGACT CAAGTGATCT GGTGAAAAGT ATAGCGGATT TGTATTTAGA AAATGCACCA
GTATTGATTA GTAATGTTAT TAAAGGGTTA ATAGACAAGG ATGCCGATCA AGTCTTTAAA
TCAGCACACT CACTAAAGTC CAGTTCGGCC AATGTAGGGG CGATAAAAAT TCAGACGTTA
GCGAGTCAAA TTGAGTTGTT TGCACGTAGT GGTAAGTTGA GCGATGCCAA TCATCTCTCA
GACACATTAT TGCCTGTGTT TGAACAAACT AAAGAGGCAA TATTGCTAAA GTTAGAGAGG
CTTGTCTAA
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| Protein sequence | MKIMNLASIR TKLIFSMLAI AILVIVIISA SLITKQYAVT KEKAEQGLAV LSDIVASNSL
SAVIFNDPSS AEKTLSALIA QPDIIHATIY DPTGNPFAAY QGHGVYQGVI DQQELLNIIS
SKKKLTQFNN DGVHSYTPLL FEGEVVGLLH ITDNMNALTK QLDDYLVLVT SASILAFTAS
LLVMFWLQSL FTKPLNTLLE VIEHISNKKD YTQRVNLKSN DEFSQLAHSF NVMIGEVDAR
GRQLETINHE LENRVSERTF ELQQTLEIAK KASQAKSEFL AVMSHEIRTP LNGIVGFSDL
LTSFKLNKEV SNTVQMINES AQTLLVLLNE VLDFSKADAN KMDLDIKTFN LPDLVTSTCH
SHKVSAGKKG LDFEVVISPL SHENYLGDAV RVRQIINNFV SNAIKFTRQG AISIAVSEHM
EASDTYITFT VKDTGIGIAA SKLESIFTPF MQADSTITRE FGGTGLGLAI CQQLVVLMNG
RYGVESTLDE GSHFWFSIPL VPQDNSISTA TVDVEPDDHV QAVFRQSIVL VAEDNVVNQL
VVKSLLESLG HQCEIVNNGQ EAIARASEKK FDLIFMDYHM PVVDGIVATQ AITDLGQSCI
NYETPIIALT ADIQPNVKRL FRNAGAKDTL LKPFTRQNLS ECMNRWVFES ESPVAVVEEV
QSEESLVFVD GPLDDIQQIS PDDSSDLVKS IADLYLENAP VLISNVIKGL IDKDADQVFK
SAHSLKSSSA NVGAIKIQTL ASQIELFARS GKLSDANHLS DTLLPVFEQT KEAILLKLER
LV
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