| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3991 |
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| Symbol | |
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| ID | 4280882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4759846 |
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| End bp | 4760877 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136812 |
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| Product | transcriptional regulator, LacI family protein |
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| Protein accession | YP_752655 |
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| Protein GI | 114565141 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00173292 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGACT CCAAGCATTG GACCTTAAAA AGTATTGCCA AAGAATTAGG TGTGTCGAAT
GCGACGGTAT CTAATGCGTT TAATCGTCCA GATCAGCTGT CGGAAAAACG CCGTATAGAC
ATTCTAGCTG CCTGTAACGA GCTAGGATAT TTTGGACCCA ATAAAGCCGC GCAATCTTTA
AGGCGTGGCA AATTTGATAC AGTAGCATTG GTATTATCGG ACAGTATTGA ATACATGGTG
TCAGATCCTG TGGCCAGTAA GTTTATGAAA GGTGTTGCGG CCGTTTTTGA GCAACATAAA
ATTAATTTAC TGTTGTTTTC TGGCAGTTCT GACAATGTGA ATAGCGTAAA TGATTTTGTC
GATGGCTTTA TTTGTTATGG TCGTCCTCGC AACCGTTTAT TGGCTGAGCA ATTAAAAAAA
ATCCGTAAAA AAGTAGTCAC AGTCGACTTT AATATTCATC GCAGTGCTTC GGTGAGTATC
GACAATAAAG CCGGTGCCTA TGAAGTGGCT AAATTGGCTA TTCAATCTGA GCAAGATCAC
GTCGCAATTC TTGGATTACG CTTGCTCGAT ACTCACTTAA CCTGCCGCGT GTATGATATT
CATTCTATGG AAATCGATAC CTCAGTAGCG CATCAGCGTT TGCAAGGCTA TTTGGATGCC
ATTGGTGATA CTGGGGTTAA GCTTGGTGAT GATCGCATTT GGAATATCCC TGAAAGTAAT
GCCGACTTTG CTGCCATAGC AGCCAAAGAA GCGCTTAATT GTGTACCGCG TCCTAATGTA
TTTTTGTGCA TGAGTGACCT AATAGCCTTG AGTTTAATGC GCGAGGCAAT CCAACAAGGT
TTGCGGATCC CTGAAGATAT TCGTGTGGTG GGTTTTGATG GTATTGATGA AGGCTCACGA
GCTATCCCGC CGCTGACAAC AGTGTTCCAG CATTCAGAAC AAAAAGGTCG TAAAGCTGCA
GAAATGTTTA TTGCTGATGC CCATCATGCT GAAGTGTTAG GTTATGAACT TTCACGTGGT
GGCAGTTGTT GA
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| Protein sequence | MPDSKHWTLK SIAKELGVSN ATVSNAFNRP DQLSEKRRID ILAACNELGY FGPNKAAQSL
RRGKFDTVAL VLSDSIEYMV SDPVASKFMK GVAAVFEQHK INLLLFSGSS DNVNSVNDFV
DGFICYGRPR NRLLAEQLKK IRKKVVTVDF NIHRSASVSI DNKAGAYEVA KLAIQSEQDH
VAILGLRLLD THLTCRVYDI HSMEIDTSVA HQRLQGYLDA IGDTGVKLGD DRIWNIPESN
ADFAAIAAKE ALNCVPRPNV FLCMSDLIAL SLMREAIQQG LRIPEDIRVV GFDGIDEGSR
AIPPLTTVFQ HSEQKGRKAA EMFIADAHHA EVLGYELSRG GSC
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