| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3989 |
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| Symbol | |
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| ID | 4280880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4756825 |
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| End bp | 4758045 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136810 |
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| Product | major facilitator transporter |
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| Protein accession | YP_752653 |
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| Protein GI | 114565139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0137476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAACC ATATGAAGGA TAATGAGAAT AGCGGTAACA CTAGGATAAG AATACTCACG
TATTTAATGT TTTTTATGTT CGCGATGACT TCTGATGCGG TGGGAGTGAT TATTCCTGAG
CTGATTAACA CATTTGATTT ATCGATGTCT CAAGCGAGCG CATTTCATTA CATGCCAATG
CTATTTATCG CATTAAGTGG ACTGTTTTTG GGCTTTTTGG CGGATAAGTT AGGCCGAAAA
ATAACAATTC TAATTGGCTT GCTGCTGTTT GCATTGGCAA GTTTTATGTT CGCATTAGGT
GAGTCATTTT ATTATTTTCT GTGTTTGTTG GCATTAGTGG GTATTGCTAT TGGGGTGTTC
AAAACGGGTG CGTTAGGGTT AATTGGAGAT ATTTCAGCTA ACTCAAAACA ACACTCAAGC
ACCATGAACA CCGTCGAAGG CTATTTCGGT GTGGGCGCTA TGGTCGGTCC GGCGATTGTC
AGTTATTTAT TGATAACAGG AGTGTCGTGG AAATATCTGT ATTTTGGTGC CGGGGTGTTT
TGTTTAATAT TATGTTGGTT AGCTTATAAA GCTGACTATC CGCAACTTAA GCGCTCATCC
ACTCAAGATA TTAATCTAGC CAGTACGTTT AGAATGATGA GAAACCCTTA CGCATTAGGC
TACTCTTTAG CGATTGGGCT TTATGTTGCG ACTGAAGTGG CTATTTATGT ATGGATGCCG
ACATTGTTAC TAAACTATGA AGGTGAGTTA GCATTAATCG CGACCTATGC ATTAACAATC
TTTTTCACAT TGCGGGCATT GGGACGTTTC TTGGGCGGTT GGATCCTCAA TCGATACAGT
TGGCAGCAAG TGATGTTTTG GTTCAGCCTA GCGATTAGTC TTTGTTACCT AGGTGCAATG
ATGTATGGCA TATCTGCAGC GGTTATTTTA TTGCCATTAT CAGGCTTGTT TATGTCAATG
ATGTATCCGA CATTAAATTC TAAAGGGATT AGTTGTTTCC CGGTTGACCA ACATGGTTCG
GTTGCTGGGG TTATTTTATT CTTTACTGCA CTTTCTGCTG CATTAGGTCC GTTGTTAATG
GGGCTGGTAG GCGACATATT TGGCCATGTT AAGTACGGGT TTTATTTAGC AACCGGCTTT
GCATTTATGT TGTGCTTATT GGCAGCTTAC AATCTGCTTC GTGATCCGTC AGGGCATTTG
TTGACCGCAG ACGCTAAATA A
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| Protein sequence | MVNHMKDNEN SGNTRIRILT YLMFFMFAMT SDAVGVIIPE LINTFDLSMS QASAFHYMPM
LFIALSGLFL GFLADKLGRK ITILIGLLLF ALASFMFALG ESFYYFLCLL ALVGIAIGVF
KTGALGLIGD ISANSKQHSS TMNTVEGYFG VGAMVGPAIV SYLLITGVSW KYLYFGAGVF
CLILCWLAYK ADYPQLKRSS TQDINLASTF RMMRNPYALG YSLAIGLYVA TEVAIYVWMP
TLLLNYEGEL ALIATYALTI FFTLRALGRF LGGWILNRYS WQQVMFWFSL AISLCYLGAM
MYGISAAVIL LPLSGLFMSM MYPTLNSKGI SCFPVDQHGS VAGVILFFTA LSAALGPLLM
GLVGDIFGHV KYGFYLATGF AFMLCLLAAY NLLRDPSGHL LTADAK
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