Gene Sfri_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3980 
Symbol 
ID4280871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4744004 
End bp4744228 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content41% 
IMG OID638136801 
Producthypothetical protein 
Protein accessionYP_752644 
Protein GI114565130 
COG category 
COG ID 
TIGRFAM ID[TIGR02976] phage shock protein B 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG ATATCGCCAT TATCGCGCTG GTCTTCATTA TTGTGGTTGG CACCACTGCA 
TCTGAAATGT TTAAGTATTA TATGAAGCAT AAGCAGCAAA CTGACACGGG CTGTGTTAGC
GATCTACAAG CCCAAAACCA AGCATTGATT GAACGGGTAC AAGTATTAGA GAGACTGGTA
ACTGACAGTG ATTTTGATTT AAAGCAGCAG TTTAAACAGC TGTAG
 
Protein sequence
MENDIAIIAL VFIIVVGTTA SEMFKYYMKH KQQTDTGCVS DLQAQNQALI ERVQVLERLV 
TDSDFDLKQQ FKQL