| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3977 |
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| Symbol | |
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| ID | 4280868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4740383 |
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| End bp | 4741981 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136798 |
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| Product | TAP domain-containing protein |
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| Protein accession | YP_752641 |
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| Protein GI | 114565127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.692071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACA GGAAGTTTAT CAACACAGTC TTAGCCAAGC GGTCAACCCG CTCTGGGTTA
TGCCAATCGG CAACACGTAC TAGCCGATGG CTCGCGGTCG CTATTGCAAT TTTACTCGCC
AACAATAGTC ATGCCGACAC ATCGCAAACC AATGTGGCAG CACCCGCTAA AACCAGTGCT
TGTTACTTAG ACGGTTTAGA CGAGCAATTA CAGTGCGGTA AAATAACTGT GCTGGAAAAC
CCTCAGCTAC CTGACGGTAA GCAAATCGAC ATTCATTTTG CTATTTTGCC AGCCATTAAA
AACACTCACC CAAATGAAGC ATTACTGGCA ATCGCAGGCG GACCAGGCCA GTCAGCCATT
GAAAATGCCG CTTTCTTTAA TCGCATGTTG ACCAAAGTTC GCCAGCAGCG CGATATTTTA
CTGATTGATC AACGTGGTAC CGGTAAATCG AACATTTTAT CTTGCGACGA TGACACCACT
GAATTACTCA GTATGAATGA TGACGATCTC GATATCATTG CGATGACAGA AAAATGCCTA
GGTCAAATTG ATGCCGATGT AAGCCAATAT GGTAGTAATA CCGCGTTAAC TGACTTCGAA
GCAGTACGCG AATATTTGGG CTACCAAAAA CTGCATTTAT ACGGTATTTC CTACGGAACA
CGTATGGCAC AGCTTTATAT GCGCCATTAC CCAGAAGCCT TATTAACAGT GACACTGGAT
GGCGTGGTGC CAATGCAACA AAGTGTCGTG GCGATTGGTG ACTCAATAGA ACGTGGTTTA
AATGTGTTAT GGCGCGACTG TAAAAGTACT CCTGCTTGCC AGCAACAATT TCCAGACTTG
GCTGACGAAT ACAATAAAGT CGACCAACTG CTGGCCACCG CTCCGATAAG CCAACAAGTA
CGAGACCCAC AAACAGATGA ACTCAGCGAG TTTTTACTCA CCCGCAGCAA GTTTAGCGGC
GCTATTAGAA TGGCGATGTA CATGGCAAAC ATCCGTGCAC TTATCCCGCA TGCTATTCAT
CAAGCGGCAC AAGGTAATTA TCAACCGATA TTAGGTATTT ACACATTAAC TGCTGATAGC
ACAGGTATTG CGATGGGCAT GCACGCATCC GTTGTGTGTG GCGAAGACAT TCACCGCATT
ACTGATCAAA TGCGTAAAGA TGCAAAAGAG TCGTACATCA GCGGCAATAT GCTAGAGGGG
TTAGAAAAAA CCTGCCAAGC CTGGCCGATT CCACAAGTGG ACGACAACTT TAGTGAACCT
ATCCTCAGTG ATATCCCCAC CTTATTGTTA TCTGGTGAAC TCGACCCGGC AACACCACCA
AACTGGGGCG CACTGGCGCA AGAAAAACTG ACAAAATCAA AGCACTTCAT TGCACCTTAT
GCAACCCACG GCGTGGCCGG TCAAAGCTGT GGCAATGACC TCGTCGCCCA GTTAGTTGAC
CAAGGTTCAG TAAAAGACAT CAACGGTGAA TGCTTACAAA AAGATGTCCG TCGTAGCTTT
TACCTTAATG CCAATACCGT AGAAGCACTA CCGGTTATCG ACACGCCCAC TGACATAGAA
ACAACAGCAC CAGCGAATAC CGCTGCGGAT AAGGAATAG
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| Protein sequence | MINRKFINTV LAKRSTRSGL CQSATRTSRW LAVAIAILLA NNSHADTSQT NVAAPAKTSA
CYLDGLDEQL QCGKITVLEN PQLPDGKQID IHFAILPAIK NTHPNEALLA IAGGPGQSAI
ENAAFFNRML TKVRQQRDIL LIDQRGTGKS NILSCDDDTT ELLSMNDDDL DIIAMTEKCL
GQIDADVSQY GSNTALTDFE AVREYLGYQK LHLYGISYGT RMAQLYMRHY PEALLTVTLD
GVVPMQQSVV AIGDSIERGL NVLWRDCKST PACQQQFPDL ADEYNKVDQL LATAPISQQV
RDPQTDELSE FLLTRSKFSG AIRMAMYMAN IRALIPHAIH QAAQGNYQPI LGIYTLTADS
TGIAMGMHAS VVCGEDIHRI TDQMRKDAKE SYISGNMLEG LEKTCQAWPI PQVDDNFSEP
ILSDIPTLLL SGELDPATPP NWGALAQEKL TKSKHFIAPY ATHGVAGQSC GNDLVAQLVD
QGSVKDINGE CLQKDVRRSF YLNANTVEAL PVIDTPTDIE TTAPANTAAD KE
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