| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3975 |
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| Symbol | |
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| ID | 4280866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4738996 |
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| End bp | 4739865 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136796 |
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| Product | ABC transporter related |
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| Protein accession | YP_752639 |
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| Protein GI | 114565125 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCCG AAGAGAAGCC CGTTTTACGC TTTAATCATG TGAGCAAAAC CTTTGCTGCA
AAACACAAAT CTGCAGCAGG TCATGCGGTG TTGGTCGATC TATCGATGAC ACTTTATCCC
GGTATGGTGG TCGGGTTATT AGGCCAAAAT GGTGCGGGTA AATCGACGTT AATGCGTTGT
GCATTAGGCA TTGTGGGCAT CGAACAAGGC GACATTTCAA CCCTTGGCGA ACCGCCTACC
GCTTTATCTG TTCAAGCAAA AGAACGAATT GGTTACGTAC CCCAGCAGCC TTTTGGTTAT
GAAGGCTTTA CCATAGATAA AGCGTTAGAA TTGCACCGCA GCTTCTATCC AAACTGGGAT
ATGACACTCG AGCAAGATTG GCTTAAACGA TTTGATTTAG ATGTTACGCA AGCGGTGCAA
AAATTATCAG TGGGCCAGCG TCAATCATTA GCATTGATAA TGGCCATGGC GTATCGGCCA
ACCTTATTAT TACTCGACGA ACCCGTTGCC AGCTTAGATC CCATTGCCAG GCGTCAGTTT
ATGAGCGACT TGTTCGATCT CGCGCTCGAT TCAGGTTCTG CAGTGTTATT TTCATCGCAT
ATCACCTCAG ATTTAGAACG TGTTGCCAGT CATGTTGCCC TGATTAAAAA AGGCCAACTG
ATACTGTTTA AAGAAATCGA CGCCTTGCGT GAAGAGGTTA AATTACTCAA CTTAGCCGAA
AACGCTCAGT TACCGTCACA TTATAAAATA TTGAGCCAAA CCGGACAAAG TGTGCTGGTG
GATACTCAAG GTAACCTATC GAATATTGCG GGTGTGCAGA GTGAAAAATC ACTCAACCTA
GAACAGTTAT TTATGGAGCT GCATCGATGA
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| Protein sequence | MEAEEKPVLR FNHVSKTFAA KHKSAAGHAV LVDLSMTLYP GMVVGLLGQN GAGKSTLMRC
ALGIVGIEQG DISTLGEPPT ALSVQAKERI GYVPQQPFGY EGFTIDKALE LHRSFYPNWD
MTLEQDWLKR FDLDVTQAVQ KLSVGQRQSL ALIMAMAYRP TLLLLDEPVA SLDPIARRQF
MSDLFDLALD SGSAVLFSSH ITSDLERVAS HVALIKKGQL ILFKEIDALR EEVKLLNLAE
NAQLPSHYKI LSQTGQSVLV DTQGNLSNIA GVQSEKSLNL EQLFMELHR
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