Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3955 |
Symbol | |
ID | 4280846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4719406 |
End bp | 4720638 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136776 |
Product | imidazolonepropionase |
Protein accession | YP_752619 |
Protein GI | 114565105 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTGGG ATCAAGTGTG GATTGATGTA AACGTGGCCA CCATGGATAC CAATATCCAA GGGGCTTACG GCGTAATACC TCAAGCGGCT ATCGCAGTAA AAGATGGCAA AATTGCTTGG GTTGGCCCGC GCAGTGAACT ACCTGAATTT GATGTACTGG CAACCCCAGT TTACAGAGGC AAAGGCGGCT GGATAACACC AGGGCTTATC GATGCACACA CACACTTAGT CTTTGCTGGT AATCGCGCTA ACGAATTTGA ACAACGTTTA CAAGGCGCGA CTTACGCCGA AATAGCTCGC GCAGGTGGCG GCATAATCTC AACGGTTAAT GCTTGTCGCG ATGCTGATGA AGCCGAACTA TTTGAACTAG GCCGACAACG CTTAAATGCC CTAGCCAGAG AAGGAGTCAC CACGGTTGAA ATTAAATCCG GTTACGGTTT AAACACTGAA ACAGAACTTA AATTATTGCG CGTTGCGCGT GAGCTAGGTG AGCATCATCA TATTGATGTA AGCACCACCT TCTTGGGCGC CCATGCTATT CCTCCAGAAT ATAAAGACAA TGCAGATGCC TATATCGACC TCGTCGTTAA TGACATGCTC CCTGCGGTAA TCGCCGAAAA CCTTGCTGAT GCCGTTGATG TATTTTGTGA AAATATCGCC TTTAATCTTG AACAAACTGA GCGAGTATTA ACTGCGGCTA AACAGGCCGG TCTGCAGATT AAACTGCATG CTGAGCAATT AACCAATATG GGCGGCAGCG CCTTAGCAGC CAAGCTTGGG GCTAAATCGG TCGATCATAT TGAGTTTCTA GATGAAGCAG GTATTAAAGC CATAAGCGAA AGCGGTACCT GTGCAACCTT GTTACCCGGC GCATTTTACT TTTTACGTGA AACCCAATTA CCACCAATCG ACTTACTGCG CCAATACAAG GTGCCAATGG TTATTGCCAG CGATTTTAAT CCGGGGTCAT CGCCTATTTG CTCCACCTTA TTAATGCTCA ATATGGCTTG CACCTTATTC AGACTCACCC CAGAAGAAGC CTTACAAGGT GTGACCATTA ATGCCGCAAA AGCACTTGGT ATCGACAATA ATGTCGGCAG TATTACCGTA GGTAAACAAG CTGATTTTTG TTTATGGGAT ATCACCACTC CTGCACAATT AGCTTATGCT TACGGGGTAA ACCTGTGTAA AACCGTTGTC AAAAATGGTC AGGTAGTTGC GCTACCCAAT TAA
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Protein sequence | MSWDQVWIDV NVATMDTNIQ GAYGVIPQAA IAVKDGKIAW VGPRSELPEF DVLATPVYRG KGGWITPGLI DAHTHLVFAG NRANEFEQRL QGATYAEIAR AGGGIISTVN ACRDADEAEL FELGRQRLNA LAREGVTTVE IKSGYGLNTE TELKLLRVAR ELGEHHHIDV STTFLGAHAI PPEYKDNADA YIDLVVNDML PAVIAENLAD AVDVFCENIA FNLEQTERVL TAAKQAGLQI KLHAEQLTNM GGSALAAKLG AKSVDHIEFL DEAGIKAISE SGTCATLLPG AFYFLRETQL PPIDLLRQYK VPMVIASDFN PGSSPICSTL LMLNMACTLF RLTPEEALQG VTINAAKALG IDNNVGSITV GKQADFCLWD ITTPAQLAYA YGVNLCKTVV KNGQVVALPN
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