Gene Sfri_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3948 
Symbol 
ID4280839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4710661 
End bp4711128 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content42% 
IMG OID638136769 
Producthypothetical protein 
Protein accessionYP_752612 
Protein GI114565098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTACAA CCGCCATCGT TATTGCTTTA CTCATTATTG TTGCCCTTGC TACCTACGCA 
GCACACTTAC TGTTAACGCT TAAACGTAAA ACACAAGCTA ACCAACAAGC ACTTTCTGAA
CGTAAGGCTA AAGCCGACGA GCGTAGACAG CAAATACTGA CTGATATCCG TTACATTGCA
GCAGCAATGC TAGAAGACCG TTGTGAACTG TCTGAAGGCG TTATGCGCAT AGGTAAACTA
TTTGATGCAT TATCCTTATC AGAACAAGTT ATGGCAGACT TCCCTAACCT GTTTACCCAT
TATGAGCTAA TTAGAAACCA TCCCATCATG GAAGCACGTA AAGAGTTACC AAAACAACAA
CGGATGAAGT TTGATTTTGA GCGGATGAAA TCAGAAGCAG AGTTAGAACG GGTTATTCTA
GACGAAGCAA AACACATAGC CGAGTTTGAT AAGCCAACCA CTCATTAG
 
Protein sequence
MSTTAIVIAL LIIVALATYA AHLLLTLKRK TQANQQALSE RKAKADERRQ QILTDIRYIA 
AAMLEDRCEL SEGVMRIGKL FDALSLSEQV MADFPNLFTH YELIRNHPIM EARKELPKQQ
RMKFDFERMK SEAELERVIL DEAKHIAEFD KPTTH