| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3942 |
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| Symbol | |
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| ID | 4280833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4702218 |
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| End bp | 4702871 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136763 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_752606 |
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| Protein GI | 114565092 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000818119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA TTGCTGTTTT ACTGAGTGGC TGTGGGGTAT TTGATGGAAC TGAAATTCAC
GAGGCTGTAT TAACCCTACT GGCGATAACG CGAGCGGGGG CGCAATATCA ATGTTTTGCT
CCAGATATAA CTCAAATGCA TGTGGTGAAT CATTTAACCG GTGAGGTCAA CACCGACGAA
ACCCGTAATG TATTGGTTGA GTCTGCGCGG ATCGCTCGTG GTGAAGTACT TAATGCAAGT
ACATTAGAGG TAAGTCAATT TGATGGTTTG GTGATCCCTG GCGGTTTTGG TGCGGCTAAA
AACTTATCTA ATTTTGCAAC TACAGGCAGT AATTGCCATA TTCAGCCAAT TGTAGAAAAC
TTTATTCGTG AGTTTGCTTT AGCGCATAAA CCTGTCGGCT TTGTGTGTAT TTCACCGGTG
ATGATCCCGA ATATTTACGG CGCAGGCGCT ATAGGTACAA TTGGAACCGA TTCTGAAACG
GCTCATGCAT TTACTGAAAT GGGCGGTAAG CATAAAAATG TGCAAGTTGA AGATATTGTT
GTGGATGAGG TCAATAAAAT CGTCAGTACA CCTGCGTATA TGCTAGCAAC GTCGATTTTA
GAGGCACATA TTGGTATTGA GAAGCTGGTT AATAAAGTAC TCGAAATGGC TTAG
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| Protein sequence | MKKIAVLLSG CGVFDGTEIH EAVLTLLAIT RAGAQYQCFA PDITQMHVVN HLTGEVNTDE
TRNVLVESAR IARGEVLNAS TLEVSQFDGL VIPGGFGAAK NLSNFATTGS NCHIQPIVEN
FIREFALAHK PVGFVCISPV MIPNIYGAGA IGTIGTDSET AHAFTEMGGK HKNVQVEDIV
VDEVNKIVST PAYMLATSIL EAHIGIEKLV NKVLEMA
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