Gene Sfri_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3930 
Symbol 
ID4280821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4690492 
End bp4690884 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content36% 
IMG OID638136751 
Productcytidyltransferase-like protein 
Protein accessionYP_752594 
Protein GI114565080 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA TTACATTCGG TACTTTTGAC ATGTTTCATA TTGGTCATTT AAATATTTTA 
GAAAGAGCGA AAGAGTTAGG CGGTAAGCTG GTTGTTGGGG TGTCATCTGA TGCTCTTAAT 
TTTAGTAAAA AACAACGAAA CCCTATTTGC GATGAAATCG ATCGAATGAG AATTGTCGCG 
GCTCTATCCT GTGTAGATCA AGTTTTTCTT GAAGAGTCAT TAGAGCTTAA AGCAGAGTAC 
ATTCAAAAGT ATCAAGCTGA TTATTTAGTG ATGGGGGATG ATTGGGAGGG ACGTTTTGAT 
CATCTATCTC ATCTATGTAA AGTAGTGTAT TTACCAAGAA CCCCTGCGAT TTCAACAACA 
ATGTTAATTG AGATCGTTAA AGAAATTAGA TAG
 
Protein sequence
MNIITFGTFD MFHIGHLNIL ERAKELGGKL VVGVSSDALN FSKKQRNPIC DEIDRMRIVA 
ALSCVDQVFL EESLELKAEY IQKYQADYLV MGDDWEGRFD HLSHLCKVVY LPRTPAISTT 
MLIEIVKEIR