Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3924 |
Symbol | |
ID | 4280815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4684098 |
End bp | 4684913 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136745 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_752588 |
Protein GI | 114565074 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.132547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAT TACCAGAAGT TGAAGTGACC CGTCTAGGGA TCAGTCCATA CCTTATTGAG CAAACGGTAA GTGAATTGAT TGTGCGCAAT GCCTCACTTC GTTGGCCTGT ACCGGCTATA GCTCAAAACA TTGTTGGTCA GCGTATTACC AATGTCCGCA GACGAGCTAA ATACTTACTC ATTGATACCG ATGCAGGAAT GACAATCGTG CATTTAGGCA TGTCAGGCAG CTTACGTATT TTACCGCGCA ATACCCCAAT CGAAAAACAT GACCATATTG ATTTAGTACT CGAAAATGGG CGCATGTTAC GTTTTAACGA TCCACGTCGC TTTGGAGCTT GGTTATGGTA TGAGTTACCA GAAGAAGCCC ATCCACTGCT ATCAAAGCTT GGCCCAGAAC CACTAAGCCC TCATTTTACG CCATTGCAAT TGCAAGCAGC ACTTGCGGGC AAGAAAAAGG CGATTAAACT GTGCTTAATG GATAATCACA TCGTGGTTGG AGCCGGTAAT ATTTACGCCA ACGAAGCTTT ATTTGCTGCC GGGATCCATC CTGAAGCCGC GGCGGGAAGC ATTGATTTAG AACGGTTAAC GATTCTAGTC AGCGAGGTTA AGCAAATTTT GGCTCACGCC ATTGAACAAG GTGGGACAAC ATTAAAAGAT TTTACTAATG CCGATGGTAA GCCTGGATAT TTTGCGCAAA AACTACATGT TTATGGTCGT GGTGGCGAAA CCTGTACAGC CTGTGGCAAT TTATTAAGTG AGATAAAACT TGGCCAACGT ACCACGGTTT TCTGTGGTTT ATGCCAACAG CGTTAG
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Protein sequence | MPELPEVEVT RLGISPYLIE QTVSELIVRN ASLRWPVPAI AQNIVGQRIT NVRRRAKYLL IDTDAGMTIV HLGMSGSLRI LPRNTPIEKH DHIDLVLENG RMLRFNDPRR FGAWLWYELP EEAHPLLSKL GPEPLSPHFT PLQLQAALAG KKKAIKLCLM DNHIVVGAGN IYANEALFAA GIHPEAAAGS IDLERLTILV SEVKQILAHA IEQGGTTLKD FTNADGKPGY FAQKLHVYGR GGETCTACGN LLSEIKLGQR TTVFCGLCQQ R
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