| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3902 |
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| Symbol | |
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| ID | 4280793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4657311 |
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| End bp | 4658651 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136723 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_752566 |
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| Protein GI | 114565052 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGTG TCAAAAAACG CCCCAGTAAT TCGTTAAAAA CACGCTTATC TTATTGGATT
TCAGCAGCCA TTTTGTCTGT TGCGATAATA GCAGCCAGCT TTACCTTTAG CAGTGCCTTT
GAAGAAGCCC ATGAGCTCCA AGATGATGTA TTGCAACAAA TGGCCGTGCT GTTTGACCAT
TACTCGCTTA CGCTAAACGA CAGAACACTC ACCCCGTTAA GCCAAGATCA GTTGGAGTTT
CAGGTTTCAG TGCAGTTATT GGGTAGTAAC TCAGCAAGCA ATGCCTTAGC CCAAAATGCC
CTAGCCTTGC CGAACAATTT AACCGATGGA TTTCATACGG TTAATTTAGC CAACCAATCT
TGGCGAGTGT TTGTACGTAC CTTGTCATCC ACTCAACGTA TCGCCATCGC CCAAGATACT
GCTATTCGTG ACGATATTGC GTTTGAAACC GCGCTGCACA CTCTGATGCC ATTGTTAGTA
TTAATTCCAA TTTTACTGTT ATTACTGGGG TATATTTTAG GCAAAATTCT TGGCCCGATT
AGTATTTTAG CCCACGAAGT TGACCGTCAA ACTGAGCACG ACCTACAGCT AATTCCCACC
ACTCAATTAC CGAGTGAAAT AGTGCCCTTT GTTGAGGCAA TTAATCGTTT ACTCAGCAAA
AATAGCCAGG TTATTGCTAG CCAAAAGCGC TTTATTGCCG ATGCTGCTCA TGAATTAAGA
TCGCCCATAA CTGCACTGTC GTTACAGGCA CAACGTCTTC AGCAGACACA GTTAACGGAC
GATGCGCGCC AGAAGCTTAA TGCACTACAA GCCGGAATAG GTCGCAGTAT TCATCTACTA
GAACAACTAT TGTCGATGGC GCGTCAACAA GATAACAGCG TCCAACAACC TCAAACAATA
TCGTTAAAAA TGGTGTTCGT TGAGGTGATT GAAGATCTGT ACCCACTTGC AGAAGCGAAA
GAGATTGATT TGGGCTTTAG CCAAGATAAC GACGCCGAAC TCAATGCTAA TCCAGTCCGT
TTAAAAACCT TAATTCACAA CCTTATCGAC AATGCGATTC GCTACACCCC AAATGGCGGT
AAAATTGATT TAAGCATTAC TAAAACAGAT CAATACATTG AGATGACCAT CAAAGACACT
GGTCCTGGTA TCGCCACAGA TGAAGCTCTA AAAGTGTTTG AACCCTTTTA TCGAGTATTG
GGCAGTAACG AATATGGCTC AGGGTTGGGA TTAGCGATTG TGGCGAGTAT TGTGCAGCAA
ATGGATGCAA AAATTAGCTT AGCGCCAACC GATGCCGTCA ATAACTGCGG GCTTTGCATT
ACGGTGCGGT TTCCTCTTTA A
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| Protein sequence | MDGVKKRPSN SLKTRLSYWI SAAILSVAII AASFTFSSAF EEAHELQDDV LQQMAVLFDH
YSLTLNDRTL TPLSQDQLEF QVSVQLLGSN SASNALAQNA LALPNNLTDG FHTVNLANQS
WRVFVRTLSS TQRIAIAQDT AIRDDIAFET ALHTLMPLLV LIPILLLLLG YILGKILGPI
SILAHEVDRQ TEHDLQLIPT TQLPSEIVPF VEAINRLLSK NSQVIASQKR FIADAAHELR
SPITALSLQA QRLQQTQLTD DARQKLNALQ AGIGRSIHLL EQLLSMARQQ DNSVQQPQTI
SLKMVFVEVI EDLYPLAEAK EIDLGFSQDN DAELNANPVR LKTLIHNLID NAIRYTPNGG
KIDLSITKTD QYIEMTIKDT GPGIATDEAL KVFEPFYRVL GSNEYGSGLG LAIVASIVQQ
MDAKISLAPT DAVNNCGLCI TVRFPL
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