| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3874 |
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| Symbol | |
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| ID | 4280765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4624770 |
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| End bp | 4626809 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136695 |
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| Product | oligopeptidase A |
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| Protein accession | YP_752538 |
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| Protein GI | 114565024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATC CATTGCTAAG TAGCGCAGAA TTACCAGAAT TTTCAAAAAT TAAACCTGAA
CACATTCAGC CTGCAGTTGA GCAAGCCATT GCCAAATGTC GTGAGACTAT TGAAGTATTA
TTAGCAAAAA ATAGCCAATA CACTTGGGAC AATCTCATTG AGCCTCTTGA AGACGTTGAT
GATGAGTTAA GTAAAATGTG GTCGCCTGTG TCGCACATGA ACTCGGTGAT CAGTAGTGAT
GAATTACGTG ATGCTCACGA TGCTTGTTTG CCGTTGTTGT CAGATTACGG CACCTATGTT
GGCCAGCATC AAGGTTTGTA CGAGGCGTAT AAATCGATCC ACGAATCGGC AGATTTTTCC
CAGTTAACTC AAGCGCAAAA AATGGTGATA GAGCAGAGCT TACGTGACTT TGAATTGTCG
GGGATCGGCT TGGATGACAG TCAAAAAGCC CGCTATGGCG AAATGGTTAA ACGCTTATCT
GAACTCACCA GCAACTTTTC TAATCAACTG TTAGATGCTA CCGAAGCGTG GACTAAGCTT
ATTACCGACG AAGCAGACTT AGCGGGTTTA CCTGAGTCAG CCATCGCCGC AGCTAAAGCT
ATGGCAGACG CCAAAGAGCA AAAAGGTTGG TTATTCACCT TAGATTTTCC GTCTTATTTG
CCTGTGATGA CCTATAGCGA AAACCGTGAG TTACGCGAAG AGTGTTACCG TGCATTTGTG
ACTCGCGCAT CTGACCAGGG TCCTAATGCT GGTGAGTTTG ATAACACCAA TAACATGAAT
GAAATTGTGG CATTGCGTCA TGAGTTAGCC AATTTACTCG GTTTTGCTAG CTACGCAGAT
AAATCGTTAG CCACCAAAAT GGCAGAAAAC CCAGCACAAG TATTGGGTTT TTTAAATGAG
TTAGGCGAAC GGTCTAAAGA CCAAGCGTCA ACTGAATTAG CCGAACTACG TGCCTTTGCC
AAAGATCATT ACAACGTGAC CGAAATGGCC TCGTGGGATT TGAGTTTTTA CGCTGAAAAA
CTGCAGCAAC ACAAGTACGA AGTGTCGCAA GAAATATTGC GTCCGTATTT CCCAGAAGAC
AAAGTCTTGT CAGGCTTGTT CTATACCGTT AATCGCTTAT TTGGTTTAAC CATTAGCGAA
CAAAAAGGCG TAGACACTTG GCATAAAGAT GTACGTTTTT TCCATATTCA TGATGCCGAT
AAAGTACACC GTGGTAGTTT TTATCTCGAT TTGTATGCTC GTAGCGGTAA ACGTGGCGGC
GCATGGATGG ACGATTGTCG CGGTCGCCGG GTTACCTCTA CTGGTTTGCA AAAGCCGGTG
GCCTATTTAA CCTGTAACTT TAATGGTCCT GTCGACGGCA AACCGGCGTT GTTTACCCAT
GACGAAGTCA CCACAATGTT CCATGAGTTT GGCCACGGCA TTCACCACAT GTTAACCAAA
GTGGATGTGG GCGGAGTGTC TGGTATTAAT GGTGTACCTT GGGATGCGGT AGAGCTACCA
AGTCAGTTTA TGGAAAACTG GTGCTGGCAA GAAGAAGCAT TAGCGGAAAT ATCTGGCCAC
TATGAAACGG GCGAACCATT ACCAAAAGCA TTGTTAGACA AAATGTTAGC GGCGAAAAAT
TTCCAGTCAG GCATGATGAT GGTGCGCCAA CTTGAGTTTT CCTTGTTCGA CTTTAGAATG
CACCACGAGT TTGACCCTGC TAAAGGCGTC GATATTCAAG GCATTTTAGA CCAAGTGCGT
AGCCAAATAG CGGTATTAAC CCCACCAAGC TTTAACCGTT TTCAACACGG TTTTGCTCAC
ATTTTTGCGG GTGGTTATGC TGCAGGTTAT TATAGCTATA AATGGGCTGA AGTATTATCG
GCAGATGCGT TCTCGCGTTT TGAAGCTGAA GGTATTTTTA ATGCTGAAAC AGGTAAAAGC
TTCTTAAATA ACATTCTTGA AATGGGTGGC AGTGAAGAGC CAATGGAGCT ATTTAAACGC
TTTATGGGCC GTGAACCCAA TACAGATGCT TTATTACGTC ACAGTGGTAT TGCGGTGTAG
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| Protein sequence | MSNPLLSSAE LPEFSKIKPE HIQPAVEQAI AKCRETIEVL LAKNSQYTWD NLIEPLEDVD
DELSKMWSPV SHMNSVISSD ELRDAHDACL PLLSDYGTYV GQHQGLYEAY KSIHESADFS
QLTQAQKMVI EQSLRDFELS GIGLDDSQKA RYGEMVKRLS ELTSNFSNQL LDATEAWTKL
ITDEADLAGL PESAIAAAKA MADAKEQKGW LFTLDFPSYL PVMTYSENRE LREECYRAFV
TRASDQGPNA GEFDNTNNMN EIVALRHELA NLLGFASYAD KSLATKMAEN PAQVLGFLNE
LGERSKDQAS TELAELRAFA KDHYNVTEMA SWDLSFYAEK LQQHKYEVSQ EILRPYFPED
KVLSGLFYTV NRLFGLTISE QKGVDTWHKD VRFFHIHDAD KVHRGSFYLD LYARSGKRGG
AWMDDCRGRR VTSTGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTMFHEF GHGIHHMLTK
VDVGGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH YETGEPLPKA LLDKMLAAKN
FQSGMMMVRQ LEFSLFDFRM HHEFDPAKGV DIQGILDQVR SQIAVLTPPS FNRFQHGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEAE GIFNAETGKS FLNNILEMGG SEEPMELFKR
FMGREPNTDA LLRHSGIAV
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