Gene Sfri_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3848 
SymbolmdoG 
ID4280739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4593681 
End bp4595360 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content46% 
IMG OID638136669 
Productglucan biosynthesis protein G 
Protein accessionYP_752512 
Protein GI114564998 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3131] Periplasmic glucans biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGCT TACTGAGTTG TGGAACTTCG GCCTCATCTC ACATTGTAAA AAAAGCGCTA 
ACGCGTTTGT CGTTAGCCAT GGCCGCAGGG CTTTGTTTTA ATCTTGCTGC ACAAGAACCC
ACACCACCCA TTATTACCCC CACATCGCCT AGCGTAACCA TACCGCTGCA AACTTATGCA
GATGAACAAG CGATAGTGAA ATCAGCTAAT AACCTGAACA CAGAAACCAA AGTGCGTTTT
GCTAAAACGG CTAACTTTGA CTCTGATACA GTGGTTAAAA TTGCGCGTAA ATTAGCGCAA
AAACCGTATG TAGAACTTAA AGACCCATTA CCGCCAGGGT TGGCTAAAAT ATCTTACGAT
GAATACCGCG ATATTCGCTT TAAGCCAGAA GCTTCTATTT GGAAAGCCGA AGGTTTGCCA
TATCAAATGC AGCTCTTTCA TCGGGGTTTT TATTTCCAAG ACTTGATTGA AATTGCCTTA
GTTGAAGGTA AGCAAGCCAG CCATTTAGCC TATAACTCAG AGTTTTTTAC TGCAGGTGAT
GTGTTGAGTC AGCGTTTGCC GACCCAAGAT ATTGGCTATT CTGGTCTACG CATCCATTAT
CCACTCAATA ATCCTGCATA TTTTGACGAG CTTATGGTAT TCCAAGGGGC GAGTTATTTC
CGCGCTTTGG GTAAAGGCAG CGATTACGGC TTGTCTTCAA GAGGATTAGC ATTAAATACC
GCAGAACCGG AAGGCGAAGA GTTTCCAATA TTTAGGGCAT TTTGGGTTGA ACGGCCAAAC
ACCGACAGTA ACTTAATCGT GGTGCATGCC TTGCTAGACA GCCCAAGCGT GGCAGGGGCA
TATCGATTTT CTGTTAGACC TGGCGAAAAC ACCCATATCG ATGTGGAAGC GACGCTATTT
CCACGTGTGG ATTTAGTTAA AGTCGGTTTA GCGCCTAGCA CCAGTATGTT TTTACATTCA
ATGAATGGTC GTCAAAACAC CGATGACTTT AGACCAGAAG TACATGATTC TGACGCGCTA
TTGATCTTAA ATGGTCGCGG TGAGCGTTTA TGGCGTCCGC TGGCTAATCC AAAGCAATTG
CAAGTCAGTG CCTTTATGGA CAACTCGCCA CAAGGGTTTG GCTTAATTCA ACGTGAACGT
AGTTTTGATG CGTATCAAGA TCTCGAAGCC CACTACGAGC GTCGCCCAAG TTTATGGGTA
GAACCGGTCG GAAATTGGGG CGCGGGTGAG GTTGTGTTAA CCGAAATTCC AACAGACTCT
GAAATTCATG ACAACATAGT TAGTTACTGG AAGCCTAAAC AACCTATCGC AGCAGGTAGC
GAGTTTCATT TTACTTATCG GTTAATTTGG GGCAGCGAGC CCGAAGTTGA TGATGGCACT
GTTATTGTGG CCCGTACCGC CAGTGGCCGC GCTGAAATCG CTAAAGCCAC ACCGAGACGT
TTGTTTGTTA TTGACTATCA AGTTAAAGAA GGTAATAACG ATGAAATTCC GGTCGCCAAA
GTGCAGAGTT CAGCGGGCGT CGTGACTAAT GTGGTGGTGT CTCGTCAGCC TAAAACCAAT
GGCTACCGTT TGGCGTTTGA AATGGATCCA CAAGATGCTG AATTGATCGA GCTACGTGCT
GAGCTTAAGT TTACTGGCCC ACGCGATGTC GAAACTTGGC TTTATCGTTG GACGCTTTAA
 
Protein sequence
MVSLLSCGTS ASSHIVKKAL TRLSLAMAAG LCFNLAAQEP TPPIITPTSP SVTIPLQTYA 
DEQAIVKSAN NLNTETKVRF AKTANFDSDT VVKIARKLAQ KPYVELKDPL PPGLAKISYD
EYRDIRFKPE ASIWKAEGLP YQMQLFHRGF YFQDLIEIAL VEGKQASHLA YNSEFFTAGD
VLSQRLPTQD IGYSGLRIHY PLNNPAYFDE LMVFQGASYF RALGKGSDYG LSSRGLALNT
AEPEGEEFPI FRAFWVERPN TDSNLIVVHA LLDSPSVAGA YRFSVRPGEN THIDVEATLF
PRVDLVKVGL APSTSMFLHS MNGRQNTDDF RPEVHDSDAL LILNGRGERL WRPLANPKQL
QVSAFMDNSP QGFGLIQRER SFDAYQDLEA HYERRPSLWV EPVGNWGAGE VVLTEIPTDS
EIHDNIVSYW KPKQPIAAGS EFHFTYRLIW GSEPEVDDGT VIVARTASGR AEIAKATPRR
LFVIDYQVKE GNNDEIPVAK VQSSAGVVTN VVVSRQPKTN GYRLAFEMDP QDAELIELRA
ELKFTGPRDV ETWLYRWTL