| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3839 |
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| Symbol | |
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| ID | 4280730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4578345 |
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| End bp | 4580357 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638136660 |
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| Product | peptidase S15 |
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| Protein accession | YP_752503 |
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| Protein GI | 114564989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTTG CCAAGCACTG CGCATACAAA ATCCGCCATA TCGAACATTG CTGGATCCCG
ATGGCCGACG GCATTCGTCT TTCAGCCCGC ATCTGGATGC CAGAAAATGC TGAAGCTAAG
CCTGTACCGG CTATTTTCGA GTTTATTCCT TATCGTAAAC GTGATGGCGT CAGACTACGC
GACGAAACCA TGCATCCATA TTTTGCCGGA CACGGCTATG CCTGTATCCG TGTGGATATC
CGTGGTAGTG GCGACTCTGA AGGTGTGCTG ACGGACGAAT ATCTGCAGCA GGAACTCGAC
GATGGTATCA CTGTTATTGA GTGGCTTGAG AAGCAACCAT GGTGCGACGG CAATATTGGC
ATGTATGGGA TCTCATGGGG GGGATTCAAT GGCTTGCAAA TTGCGGCAAT GCAACCACCG
CAACTTAAAG CTATCGTCAG CGTTTGCTCT ACTGATGATC GCTATGCCGA TGATGTGCAC
TATATGGGAG GCTGCCTGCT CGGTGATAAT CTTTCTTGGG CCTCGACGAT GTTTGCTTAC
AACTCTTTAC CACCGGATCC ACAAATTGTC GGTAACAAGT GGCGCGACAT GTGGTTTGAA
CGCCTTAAAG GCAGTGGCTT ATGGCTCGAT ACTTGGCTTA ATCATCAACA CCGTGACGAA
TATTGGCAAC ATGGCTCAAT TTGCGAATAT TTTTCTAAAG TACATATCCC GGTCATGGCT
GTCAGCGGCT GGGCCGATGG CTACAGTAAT GCAGTTTTTC GGCTGCTCAC CAACTTGCCT
GGTCCGAGAC AAGGATTAAT TGGCCCCTGG AGCCATAAAT ACCCGCATAT TGGCATGCCC
GGCCCTGCGA TAGGTTTTTT GCAGGAATGT CTGCGGTGGT GGGATAAATG GTTGAAAGGG
ATTGAGACCG GCATTATGGA CGAGCCCATG CTGCGGGCAT GGATGCTGGA CAGTATGCCT
CCGTCAACGT CTTACCATCA ACGCTTTGGC CGCTGGGTCA GTGAACCAAG TTGGCCTTCA
TCTAATATTG GCACACAAGT ATTCAAACTT GATAAATACC GCTTAGTAGA TGAGTGTGCA
GATGTTGCTG AGGAAGAGCT GTGTTTGCAG TCGCCATTGA GCAACGGTCT GTTTGCGGGT
AAATGGTGTT CATATAGCAC GACACCTGAT CTTCCCCATG ATCAGCGCGA AGAAGAAGGC
GGAGCGTTAG TTTTCACAAG TGAGGCTCTC GACACCACAC TTGAGATAAT GGGGGCTGTG
GTAATTGAAC TAGAATTATC GGCCAATAAG CCAATGGCAA TGATCGCTGT GCGTCTATCG
GATGTGCAAC CAGATAACAA AAGTTCGAGG GTAACATACG GCCTGCTGAA CCTGACCCAT
AGAGATAGCC ATGAAAATCC GACTCCACTG CAACCAAATA AGCGCTATTG GGTAAAGCTT
CAGCTTAACG GTATCGCGCA GACCTTCCCT AAGGGCCACC GGATCCGAAT TGCAATTTCT
TCCTCTTATT TTCCGCTAGC TTGGCCTCCA GCAGAGTCGA CACAACTCAA GATTTACACT
GGTTGCAGTC GGGTGATATT GCCGAGTCGA ATCCCACGTG AAGAAACGAT AACTTTCCTT
GATCCTGAGG CTTCCGTCAG TGGTGCCAAG CAGCAACTTA TAGAAGGACA TCATAACTGG
CGAGTAATCC GCGAACTGGA CAAGGATTTG TCTACTTTAG AAGTCATTAA CGACAACGGT
ACTTACCTCC TCGAAGATAT CGACTTGATT GTGAATCGCG AAGCGAATGA GTGGTACTCC
TATCAGCGTG ATGACTTTCA ATCGGCACAG GGTAAAACTC TCTGGCGATG GGGGTTTAAG
CGAGGTGACT GGACTGTAGA GACCGTCACT CGAACCTTAC TGCACTGCGA TGAGTTTTAT
TTTTATCTGG ATGCAGAACT AGACGCTTAT GAAGGAGACA AGCGCGTTTA TTCGCAAAAC
TGGAACCTTC GTATTAATCG TAACTTGGTT TGA
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| Protein sequence | MTVAKHCAYK IRHIEHCWIP MADGIRLSAR IWMPENAEAK PVPAIFEFIP YRKRDGVRLR
DETMHPYFAG HGYACIRVDI RGSGDSEGVL TDEYLQQELD DGITVIEWLE KQPWCDGNIG
MYGISWGGFN GLQIAAMQPP QLKAIVSVCS TDDRYADDVH YMGGCLLGDN LSWASTMFAY
NSLPPDPQIV GNKWRDMWFE RLKGSGLWLD TWLNHQHRDE YWQHGSICEY FSKVHIPVMA
VSGWADGYSN AVFRLLTNLP GPRQGLIGPW SHKYPHIGMP GPAIGFLQEC LRWWDKWLKG
IETGIMDEPM LRAWMLDSMP PSTSYHQRFG RWVSEPSWPS SNIGTQVFKL DKYRLVDECA
DVAEEELCLQ SPLSNGLFAG KWCSYSTTPD LPHDQREEEG GALVFTSEAL DTTLEIMGAV
VIELELSANK PMAMIAVRLS DVQPDNKSSR VTYGLLNLTH RDSHENPTPL QPNKRYWVKL
QLNGIAQTFP KGHRIRIAIS SSYFPLAWPP AESTQLKIYT GCSRVILPSR IPREETITFL
DPEASVSGAK QQLIEGHHNW RVIRELDKDL STLEVINDNG TYLLEDIDLI VNREANEWYS
YQRDDFQSAQ GKTLWRWGFK RGDWTVETVT RTLLHCDEFY FYLDAELDAY EGDKRVYSQN
WNLRINRNLV
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