| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3836 |
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| Symbol | rph |
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| ID | 4280727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4574888 |
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| End bp | 4575601 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136657 |
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| Product | ribonuclease PH |
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| Protein accession | YP_752500 |
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| Protein GI | 114564986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCCAA GTAACCGTAC ACCAGCTCAA ACTCGCCCTA TCACTATTAC GCGTTCTTTT
ACTGCACATG CTGAAGGCTC TGTTTTAGTT GAGTTTGGCG ACACAAAAGT ATTATGTACA
GCAAGTTTCA CTGAAGGCGT GCCGCGCTTT CTTAAAGGCC AAGGCCAAGG TTGGGTAACA
GCTGAATACG GTATGTTACC GCGTTCAACT CACAGCCGCA TGGACCGTGA AGCGGCTCGT
GGTAAGCAGT CTGGCCGTAC TCAAGAAATT CAACGTTTAA TTGGTCGTGC ATTACGTGCA
GCTGTAGACA TGAAGTTGTT AGGTGAAAAC ACTATCGTTA TCGATTGTGA TGTTATTCAA
GCTGATGGCG GTACGCGTAC TGCGGCTATT ACTGGTGCTT GTGTGGCGTT AGTTGATGCG
CTTAACTGGG CTCGTGGTAA AGGCATTATT AAAGCTAACC CACTTAAGTT TTTAATTGCA
GCTGTTAGTG TTGGTATTTA CAAAGGCGAA GCGATCAGTG ATTTAGAATA CATTGAAGAC
AGTGCTGCTG AAACTGACAT GAACGTTGTG ATGACAGAAA CCGGTAAGAT TATTGAAATT
CAAGGTACTG CAGAAGGCGA GCCATTTAGC CATGAAGAGT TACTTGAGTT GTTAGTGTTA
GCTAAAAACA GTATTCGCGA AATTGTCGAT GTGCAAAAAG CCGCATTAAG TTAA
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| Protein sequence | MRPSNRTPAQ TRPITITRSF TAHAEGSVLV EFGDTKVLCT ASFTEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA AVDMKLLGEN TIVIDCDVIQ
ADGGTRTAAI TGACVALVDA LNWARGKGII KANPLKFLIA AVSVGIYKGE AISDLEYIED
SAAETDMNVV MTETGKIIEI QGTAEGEPFS HEELLELLVL AKNSIREIVD VQKAALS
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