Gene Sfri_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3831 
SymbolslmA 
ID4280722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4568338 
End bp4568931 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content42% 
IMG OID638136652 
Productnucleoid occlusion protein 
Protein accessionYP_752495 
Protein GI114564981 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA GCCCTAAAAT AAATCGTCGT GAGCATATTT TACAATGCTT GGCGCAAATG 
CTCGAAACCA GCCCAGGTCA ACGTATAACA ACAGCAAAGC TCGCCGCCGA AGTTGGCGTG 
TCAGAAGCCG CACTGTATAG GCACTTCCCC AGTAAAGCGC GGATGTTTGA AGGCTTAATC 
GAATTTATTG AAGATGCGAT TTTATCACGC TTAAACATCA TCATGGACGA AGAAAAAGAC 
ACCATGACCC GCTGCCAGTT GGTACTACAC CTGCTATTAG TATTTTCTGA ACGTAATCCA 
GGTATTTCAA GGGTACTTAA TGGTGATGCT CTGCTAGGTG AAAATGAACG TCTACGAAGT 
AGGATCGACG TGCTATTTGC CAAAATAGAA ACACACATCA AACAAATTCT ACGTGAAAAA 
ACTTTGCGTG AAGGAGTAGG CTTTAATATC GATGAAGCCA TTCTCGCCAA CTTGCTGTTA 
GCCTTTGCAG AAGGACGTAT TTCACAGTTT GTCCGCAGTG AGTTTAAACA AAAGCCAACA 
CAACACTTTG ATGAACAGTG GACGTTTATT CAACAGCAAT TGCTAAGAAG TTAA
 
Protein sequence
MAESPKINRR EHILQCLAQM LETSPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI 
EFIEDAILSR LNIIMDEEKD TMTRCQLVLH LLLVFSERNP GISRVLNGDA LLGENERLRS 
RIDVLFAKIE THIKQILREK TLREGVGFNI DEAILANLLL AFAEGRISQF VRSEFKQKPT 
QHFDEQWTFI QQQLLRS