| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3824 |
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| Symbol | |
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| ID | 4280715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4562113 |
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| End bp | 4563021 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136645 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_752488 |
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| Protein GI | 114564974 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTGATT TAGAATACCG TAAAGGGGTG CTTCTCGCCA TTTGCGCCTA CACCATCTGG
GGTGTTGCCC CGCTTTATTT CAAATTACTA CATCATGTGC CTGCCACCGA AATATTAATG
CACCGTGTCA TTTGGTCATT TATATTCATG GTTATTTTGA TGCAATTCAT TGGTGGATTT
AGTCGTTTAC GTCTTATTTT AAAACAGCCT AAGCAACTAC TAATATTACT GATCACTTCT
GTATTAATTG CCGCTAACTG GTTACTTTTT ATCTGGGCTG TTAACAACGA CCACATGCTC
GATGCTAGCC TAGGCTATTT TATCAATCCG CTGTTTAACG TGTTACTGGG AATGGTATTT
CTGGGTGAGC GCTTGCGAAA ATTACAATGG GTTGCGGTGG CGTTAGCCAG TATAGGAGTA
CTAGTGCAGT TGGTCTCTTT TGGCTCTATT CCGCTAGTAT CATTAGCGCT GGCTGCCAGC
TTTGGTTTTT ATGGTTTACT GCGCAAAAAA GTCAATATTG ACGCCAAATC AGGTTTATTA
GTCGAAACAG CAATCTTGTT ACCAATCGCT CTGGGTTATC TATTCATCAC CTTAGACAGT
TCGACAACTA GCATGCTGAC CAACACTCTC GACCTCAATT TACTGTTAGT CGCTGCCGGT
ATTGTCACAA CAATCCCGTT ACTGTGTTTT GCAGGTTCTG CGGTCAGAAT TCCCTTTTCG
ATTTTAGGTT TTTTCCAATA CATTGGCCCT AGCATCATGT TCATCTTAGC GGTAAAACTG
TTTAATGAGC CGTTTGATAT CGAAAAAGGC ATTACCTTTG GATTTATTTG GGGCGCGTTA
GTTATCTTTG TTGGCGACAT GACATTGCAA CGCCAACGAC GTAACGCCTT AGCCAAAGCG
TCAGCATAA
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| Protein sequence | MPDLEYRKGV LLAICAYTIW GVAPLYFKLL HHVPATEILM HRVIWSFIFM VILMQFIGGF
SRLRLILKQP KQLLILLITS VLIAANWLLF IWAVNNDHML DASLGYFINP LFNVLLGMVF
LGERLRKLQW VAVALASIGV LVQLVSFGSI PLVSLALAAS FGFYGLLRKK VNIDAKSGLL
VETAILLPIA LGYLFITLDS STTSMLTNTL DLNLLLVAAG IVTTIPLLCF AGSAVRIPFS
ILGFFQYIGP SIMFILAVKL FNEPFDIEKG ITFGFIWGAL VIFVGDMTLQ RQRRNALAKA
SA
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