| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3816 |
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| Symbol | |
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| ID | 4280707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4550575 |
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| End bp | 4551927 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136637 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_752480 |
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| Protein GI | 114564966 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAGTGTTAAC ACTGGCGATT AGCGCCATTG TATTTGGGGC AACAACTCAA
GTGAACGCGG CAGGTTTCCA ACTTGCAGAA TACTCAGCGA CAGGTTTGGG CCGTGCATTT
GCTGGTGAAG CAGCTATTGC AGACAATGCG TCAACTCAAG CGCGTAATCC AGCCATGCTA
GCTTATCTAG AAGGCCGCCA AGTATCAGCG GGTGGCATTT ATGTTATGCC AAATGTTGAT
GTGGTTGGTG ATGTCGGTAT TTCTTCACCG TTATTAGGCT CAGAGCCATT AGTGATTGGT
GCTGACGCAT ACGATGTTGC TGACAATGCA TTTGTGCCAA ACTTTTATTA TTCAAACCAG
TTGAATGATC AATGGACTTG GGGTCTAGCG GTTAATTCAA ATTATGGTTT AGCAACTGAT
ATTCCGGTAG CGGATGCAGC GGCTATTTTT GGCAGTAAAA CCTCAATTAC CACTGTCGAG
TTTAATCCCA ATGTTGCTTT CCGTGTTGAT GACTCATTCA CTGTAGGTGC AGGCTTACGT
GTTGTGTACG GTGAAGGTGA AGTTAGTGCA ACCGCTCCAG GTTGGATTGA TGCGATTAAA
GCTAATCCTA ACTTACCTGC AAGCATTAAT GCACGTTTAC CTTCAGGTGG TACCAATCTA
AAGTCAATGG AAGGTGATGA TGTTGGCTAT GGTTGGAAAG CGGGCGCGAG CTGGCAAATT
AACTCAGCAA ACCGCATCGG TTTGGCTTAT CACAGTAGTG TCGATCTTAA ATTAGACGGT
CATGTGTCTG GCGTGGCTTA TAACGGTGGT CAAAATATTG AAATTGAGGG CTACTTACCT
ATTGAGTTAC CTGCATTTGC GGAACTGGCT TCTTACCATC AGTTAACTGA AAACTGGGCA
ATGCATGCAA GTGTTAATTG GACAGAATGG AGTGTGTTTG AACAACTAGT GGCGTACTTC
CCTGGTGATG TTAAGCCTGT CGGTGGCCTA GAGTCAGACG TGGTAAAAGA AGAGAACTTT
AAAGATAACT GGCGTTATGC GCTTGGTACC ACCTATACAC TTAATGACCA GTGGACATTA
CGTGCTGGTA TGGCGCTAGA TAAAACCGCG GTTGATGACC AACACCGCAC CACCACCATT
CCAGATTCTG ACCGTTTATG GTTCAGTGTG GGTACCGGTT ATCAAGTCTC TAAAAATCTG
AATGTTGATG TTGGTGTGAC TTACATTCGC ACTCATGGTG ATGCACCCAT TACAGAGACT
CAGAGCCTGC AAAATATTGC ATCGGTTAGC TTCACTGGTG AAGCAACGGG TGACGTATGG
TTAACAGGCG TACAGTTAAG TTATAAGATG TAA
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| Protein sequence | MKKTVLTLAI SAIVFGATTQ VNAAGFQLAE YSATGLGRAF AGEAAIADNA STQARNPAML
AYLEGRQVSA GGIYVMPNVD VVGDVGISSP LLGSEPLVIG ADAYDVADNA FVPNFYYSNQ
LNDQWTWGLA VNSNYGLATD IPVADAAAIF GSKTSITTVE FNPNVAFRVD DSFTVGAGLR
VVYGEGEVSA TAPGWIDAIK ANPNLPASIN ARLPSGGTNL KSMEGDDVGY GWKAGASWQI
NSANRIGLAY HSSVDLKLDG HVSGVAYNGG QNIEIEGYLP IELPAFAELA SYHQLTENWA
MHASVNWTEW SVFEQLVAYF PGDVKPVGGL ESDVVKEENF KDNWRYALGT TYTLNDQWTL
RAGMALDKTA VDDQHRTTTI PDSDRLWFSV GTGYQVSKNL NVDVGVTYIR THGDAPITET
QSLQNIASVS FTGEATGDVW LTGVQLSYKM
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