| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3809 |
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| Symbol | murE |
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| ID | 4280700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4542421 |
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| End bp | 4543911 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136630 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_752473 |
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| Protein GI | 114564959 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAA ATGATTTATT AGCGCCGTGG TTCCATTACT CTGGTCGCGA ATCCGTTAAT
GGATTAACGC TAGACAGCCG TGACGTTGAA CGTGGCGGTT TATTTGTGGC ATTACCAGGT
CATAAAGTCG ATGGTCGAGC ATTTATTCCT CAAGCGATTA ATGCTGGAGC AACGGCGATA
CTGATCCATA CCGATAATCC AGATGAACAT GGCATAGTCG ATCGTCTTCA ATATACTGTG
CCATTAGTGT TTTTTTGCCA ACTAGGCCGC CAATTATCGG CCGTAGCCGC ACAGTTTTAC
TTATCCAATA GCCAATCGTT ATCTTTAATT GGGATCACCG GTACCAATGG CAAAACATCT
GTAAGCCAAA TTATTGCTCA AATTGTTTAT TTACTCGGAC ATCAAGCCGC TGTAATGGGC
ACATTAGGAA ATGGTTTGTG GGGCCAACTT GTAGATAGCG GCAATACGAC TGCTGATGCC
ATAACGGTCA TGCGCCAACT TAGTGAGTTT GCAGCAGAAG GTGCTGAACT GTGTGCTATG
GAAGTGTCCA GCCATGGTTT AGTACAAGGG CGTGTTGAAG CTGCACCATT TGAGATTGCA
GTGTTTACAA ATTTAAGCCG CGATCATCTA GATTATCATG GTGATATGGA TTCCTACGCC
GCTGCTAAAA AACGCTTATT TAAATTTCCT AGCATAAAGC ATGGTGTGAT TAACATTGAT
GATGCTGTGG GTGCGAAATG GTTGACCGAA TTGGCGAGCG ACCAGAATAA ATCTTTCAGC
ATTAAAGGGA ATTCTGCTGC CGACTTTTAC TGTGATGCCA TTGAATATCA TGATGCAGGT
GTCACCGCGA CATTGCATTT TGTCGAAATT GATAGTGAAA AGTCAGTAAG TGTGCAGCTT
AACTCGCCGC TATTAGGTGC ATTTAACTTG TCTAACCTAG TGGCAGCAAT AGCTGTTTTG
TATTTACAGG GCAAGCCAAT GGCATCTATT TTGGCTGTGC TCCCATTGTT GATTCCTGTT
GCGGGTCGTA TGGAGCGTTT TTCATCTGTT AACAACGCTA CTTTGGTTGT TGATTATGCC
CATACTCCAG ATGCAATTGA GCAAGCATTA AAAGCATTAA GGTTGCACTG CAAAGGAACG
TTATGGTGCG TATTTGGCTG CGGTGGCGAT CGTGATAAAG GTAAACGTCC TTTGATGGCA
CAAGCCGCTG AGCGATATGC AGATAAAGTG ATGATCACAA GTGACAATGC GCGTAGTGAA
GATCCACAAA CAATTATCAA CGATATTTTA CAGGGTATTA GTCAACCTCA AAAGGTGCTT
ACCCGGGTAG ACCGGATTGA AGCCATTACC CATGTTGTTT CATTAGCACA AGTTAACGAT
ATTGTACTGC TTGCTGGTAA AGGTCATGAA ACCTATCAAG AAGTGGCAGG TGAACGTATT
GATTATGATG AACGCGCTTT GGCATTTAAG TTGTCTCAGG AGGCATCATG A
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| Protein sequence | MLLNDLLAPW FHYSGRESVN GLTLDSRDVE RGGLFVALPG HKVDGRAFIP QAINAGATAI
LIHTDNPDEH GIVDRLQYTV PLVFFCQLGR QLSAVAAQFY LSNSQSLSLI GITGTNGKTS
VSQIIAQIVY LLGHQAAVMG TLGNGLWGQL VDSGNTTADA ITVMRQLSEF AAEGAELCAM
EVSSHGLVQG RVEAAPFEIA VFTNLSRDHL DYHGDMDSYA AAKKRLFKFP SIKHGVINID
DAVGAKWLTE LASDQNKSFS IKGNSAADFY CDAIEYHDAG VTATLHFVEI DSEKSVSVQL
NSPLLGAFNL SNLVAAIAVL YLQGKPMASI LAVLPLLIPV AGRMERFSSV NNATLVVDYA
HTPDAIEQAL KALRLHCKGT LWCVFGCGGD RDKGKRPLMA QAAERYADKV MITSDNARSE
DPQTIINDIL QGISQPQKVL TRVDRIEAIT HVVSLAQVND IVLLAGKGHE TYQEVAGERI
DYDERALAFK LSQEAS
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