| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3796 |
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| Symbol | |
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| ID | 4280687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4526231 |
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| End bp | 4528951 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136617 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_752460 |
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| Protein GI | 114564946 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000547853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGGCA AACTACTGAC AAAAGTATTC GGAAGTCGCA ACGACCGCAC CCTGAAAAAT
CTTGGAAAAA TTGTTATTCA AATTAATGCA TTAGAAGCTG ATTACGAAAA GCTATCTGAT
GAAGAACTCA AAGCAAAAAC GACAGAGTTC CGCACACGTT TAGAAAACGG CGAAACCTTA
GATAATATCA TGGCAGAAGC ATTTGCTGTT GTACGTGAAG CATCAAAGCG CGTATTTGAT
ATGCGTCCGT TTGATGTTCA ATTACTTGGC GGCATGGTTT TAGACAGTAA CCGTATTGCT
GAAATGCGAA CCGGTGAAGG TAAAACCTTA ACAGCAACTT TGCCAGCATA CCTTAACGGC
ATAACGGGCA AAGGTGTTCA CGTCATTACA GTGAACGACT ACTTAGCTAC GCGTGATGCA
GAAAATAACC GTCCACTGTT TGAATTTTTA GGCTTAAGTG TCGGAATTAA CGTTGCAGGT
TTAGGCCAAT TCGAAAAGAA ACAAGCCTAC GATGCAGACA TTACCTACGG TACTAATAAT
GAGTTCGGTT TCGATTACCT TCGTGACAAC ATGGCGTTTT CCCCGCAAGA GCGTGTTCAA
CGACCATTAC ATTATGCACT TATTGATGAA GTCGATTCAA TTCTAATTGA TGAAGCTCGT
ACACCGTTGA TTATTTCGGG AGCGGCTGAA GACAGCTCTG AGCTATACGC TAAAATCAAT
TTATTAATTC CAAGTTTAAT TCCTCAAGAC AAAGAAGACA CCGAAGACTA TGTTGGCGAA
GGTGACTACA GTATTGATGA GAAGGGTAAA CAGGTTCATT TAACTGAACG TGGTCAAGAG
AAAGTTGAAC TGCTTTTAAT TGAAAAAGGC ATGTTAGCAG AAGGTGACTC GCTCTACTCA
GCAACTAATA TCTCTTTGCT TCATCATGTT AACGCTGCAC TTCGTGCACA TACGTTATTT
GAAAAAGACA TTGATTACAT TGTTCAAGAT GATGAAGTCA TTATTGTCGA CGAACACACA
GGCCGTACTA TGCCTGGTCG TCGATGGTCA GAAGGCTTAC ATCAAGCTGT TGAAGCCAAA
GAAGGCGCTA AAATCCAGAA TGAAAACCAA ACTCTGGCTT CTATCACTTT CCAAAATTAT
TTCCGTCAAT ATGAAAAGCT TGCCGGTATG ACAGGTACAG CAGATACCGA AGCATTCGAA
TTCCAACATA TCTATGGTTT AGATACGGTT GTTGTTCCTA CAAATCGCCC AATGGTTCGT
AAAGATATGG CCGACTTGGT CTATCTTACT GCGCCAGAAA AATACGCTGC GATAATTAAA
GATATTGAAG GTTGTCGTGA ACGTGGCCAA CCTGTATTAG TGGGTACTGT CTCTATTGAG
CAATCAGAGC TACTTAACTC ATTATTGAAA AAAGCCAATA TTCCGCATAG CGTGCTTAAT
GCTAAATTCC ATGAAAAAGA AGCTGAAATT GTTGCTCAAG CAGGTAGTTT AGGTGCTGTA
ACGATTGCAA CTAACATGGC TGGCCGTGGT ACAGATATCG TATTAGGCGG TAACTGGAAC
ATGGAAATTG AAGCACTAGA AAATCCAACG GCAGAACAGA AAGCTAAGAT TAAAGCTGAC
TGGAAAATAC GTCATGATGA AGTGCTTGCT GCAGGTGGTT TGCATATTCT AGGTACAGAA
CGTCACGAAT CCCGTCGTAT CGATAATCAG TTACGCGGTC GTGCCGGTCG TCAAGGTGAT
GCCGGTTCTT CACGTTTTTA CTTATCGATG GAAGATAGCT TAATGCGTAT CTTCGCTTCA
GATCGAGTAT CTGGGATGAT GAAAAAACTC GGTATGGAAG AGGGTGAGGC TATTGAGCAT
CCTTGGGTAT CACGTGCTAT TGAAAATGCT CAACGTAAAG TCGAAGCTCG TAACTTTGAT
ATCCGTAAGC AATTACTCGA ATACGATGAT GTCGCTAACG ATCAACGCCA AGTTGTCTAT
GCACAGCGTA ACGAGTTAAT GGATGCAGAA AGCATTCAAG ACACTATTCA GAATATAGAA
CAAGATGTGA TCAGTGGAAT AGTCGATCAA TATATCCCAC CGCAATCACT TGAAGAACTT
TGGGATGTAC CGGGGCTTGA ACAACGCCTT GGTAATGAAT TTGGCCTAAA GCTAACAATC
CAAGAATGGT TAGATCAAGA TGATAATCTG CATGAAGAAA CGTTGCGCGA ACGGATTCTA
ACGTCATGGA GTGAATTATA TAAAGCTAAA GAAGAAATGG TAGGTGCACA AGTATTACGT
CAATTTGAAA AAGCGGTAAT GCTACAAACA CTCGATGGAC TCTGGAAAGA GCACTTAGCT
GCCATGGATC ATTTACGCCA AGGTATTCAT TTACGTGGTT ATGCACAAAA AAATCCAAAG
CAAGAATATA AGCGTGAATC GTTTGAATTA TTCCAGCAAT TACTTGAAAC ACTGAAAAAT
GACGTGATAA GTGTGCTGTC TAAAGTACAA GTTCAAGCGC AGTCAGATGT TGACGAAATG
GAGCAGCGTC GCCGTGATGA AGAAGCAAAG ATTAAACTGG CTTATCAACA CGCATCAGTA
GAAGCATTAA GTGATGCTGG TGAGCAACAA ATAGAAGCAC CTAAAACAGT GATCCGTGAA
GGTGAGAAGA TAGGACGTAA CGATCCATGT CCATGTGGTT CAGGTCAAAA GTACAAACAA
TGTCACGGTA AACTCAGTTA A
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| Protein sequence | MLGKLLTKVF GSRNDRTLKN LGKIVIQINA LEADYEKLSD EELKAKTTEF RTRLENGETL
DNIMAEAFAV VREASKRVFD MRPFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNG
ITGKGVHVIT VNDYLATRDA ENNRPLFEFL GLSVGINVAG LGQFEKKQAY DADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYAKIN
LLIPSLIPQD KEDTEDYVGE GDYSIDEKGK QVHLTERGQE KVELLLIEKG MLAEGDSLYS
ATNISLLHHV NAALRAHTLF EKDIDYIVQD DEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGAKIQNENQ TLASITFQNY FRQYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMADLVYLT APEKYAAIIK DIEGCRERGQ PVLVGTVSIE QSELLNSLLK KANIPHSVLN
AKFHEKEAEI VAQAGSLGAV TIATNMAGRG TDIVLGGNWN MEIEALENPT AEQKAKIKAD
WKIRHDEVLA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS
DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEYDD VANDQRQVVY
AQRNELMDAE SIQDTIQNIE QDVISGIVDQ YIPPQSLEEL WDVPGLEQRL GNEFGLKLTI
QEWLDQDDNL HEETLRERIL TSWSELYKAK EEMVGAQVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLETLKN DVISVLSKVQ VQAQSDVDEM
EQRRRDEEAK IKLAYQHASV EALSDAGEQQ IEAPKTVIRE GEKIGRNDPC PCGSGQKYKQ
CHGKLS
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