| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3765 |
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| Symbol | hslU |
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| ID | 4280658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4475031 |
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| End bp | 4476356 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136578 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_752431 |
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| Protein GI | 114564917 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000246667 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACTCCACG TGAAATTGTT CACGAACTAG ATGCACATAT CATTGGCCAA
CAAAATGCCA AACGCTCAGT AGCCGTTGCA TTGCGAAACC GCTGGCGCCG GATGCAACTT
GAGCCAGAAC TTCGCCATGA AGTGACTCCA AAAAATATTT TAATGATTGG CCCTACCGGT
GTTGGTAAAA CTGAAATCGC CCGTCGTTTA GCTAAATTGG CTAACGCCCC CTTTATCAAA
GTTGAAGCGA CCAAATTTAC CGAAGTAGGT TATGTCGGTA AAGAAGTGGA ACAAATCATC
CGTGATTTAA CCGACTCAGC AGTGAAAATG ACTCGCGAAC AGCAAATGAA AAAATGCCGT
CATCGCGCCG AAGAAATGGC CGAAGAACGT ATTTTAGATG CGTTATTGCC TAAGCCAAAA
GATGACTGGG ATACCGACCA AAAAGATGAC TCGACTACCC GTCAGGTTTT CCGTAAAAAG
CTGCGCGAAG GTCAATTAGA CGACAAAGAA ATTGAAATAG ATGTTGCTGC GCCTCAAGTT
GGTGTTGAAA TCATGGCCCC TCCAGGCATG GAAGAAATGA CCAATCAGTT ACAAGGCTTA
TTTCAAAATC TTGGCCAAAG CACCTCTAAA CGTAAAAAGC TTAAAATCAA AGATGCTTAC
AAGCAGTTGG TTGAAGATGA AGCGGCAAAG CTAGTCAATC AAGAAGACTT AAAAGAACAA
GCCATCGAGC TGGTTGAGCA AAATGGTATT GTGTTTTTAG ACGAAATCGA CAAAATTTGT
AAGCGCGGTG AAAGCTCAGG TCCCGATGTA TCGCGTGAAG GAGTGCAACG TGACTTACTG
CCATTAGTCG AAGGCTGCAC AGTTTCCACT AAACACGGCA TGGTTAAAAC CGACCACATT
TTGTTTATTG CTTCTGGTGC ATTCCAGATG TCTAAACCGT CTGATCTAAT TCCAGAGCTT
CAAGGCCGTT TACCTATTCG TGTTGAATTA GACGCCCTTA CCGCAGCTGA TTTTAAACGC
ATTCTAACAG AGCCATTTGC CTCACTTACT GAGCAACATG TCGCCCTAAT GAACACCGAA
GGCGTCACCA TCGAATTTAC AGAGTCAGGT ATTGAACGCA TTGCAGAAGC GGCATGGCAA
GTGAATGAGC GCACCGAAAA CATTGGTGCA CGTCGTTTAC ATACCGTGAT GGAAAAATTG
ATGGAAGAGA TTTCATACGA TGCTTCTGAA AAGTCAGGTT CTAAATTTGT CATTGACGCT
GAATATGTCA ATGATCACCT TGATACCTTG GTACAAGATG AAGATTTAAG CCGCTTTATT
TTATAA
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| Protein sequence | MSEMTPREIV HELDAHIIGQ QNAKRSVAVA LRNRWRRMQL EPELRHEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDSAVKM TREQQMKKCR
HRAEEMAEER ILDALLPKPK DDWDTDQKDD STTRQVFRKK LREGQLDDKE IEIDVAAPQV
GVEIMAPPGM EEMTNQLQGL FQNLGQSTSK RKKLKIKDAY KQLVEDEAAK LVNQEDLKEQ
AIELVEQNGI VFLDEIDKIC KRGESSGPDV SREGVQRDLL PLVEGCTVST KHGMVKTDHI
LFIASGAFQM SKPSDLIPEL QGRLPIRVEL DALTAADFKR ILTEPFASLT EQHVALMNTE
GVTIEFTESG IERIAEAAWQ VNERTENIGA RRLHTVMEKL MEEISYDASE KSGSKFVIDA
EYVNDHLDTL VQDEDLSRFI L
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