Gene Sfri_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3758 
SymbolrpmE 
ID4280651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4466787 
End bp4466999 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content40% 
IMG OID638136571 
Product50S ribosomal protein L31 
Protein accessionYP_752424 
Protein GI114564910 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GTATTCACCC AAATTACGCT GAAATCACTG CAACTTGTAC TTGTGGTAAC 
ATCATCAAAG TGAACTCAAC TGCAGGTAAA AACCTACACT TGGACGTATG TGGTGCATGT
CACCCATTCT ACACTGGTAC TCAGAAAGTT GTTGATACTG GTGGTCGTAT TGACAAGTTC
AACAAGCGTT TTGGTATGCT TGGTAAAAAG TAA
 
Protein sequence
MKTGIHPNYA EITATCTCGN IIKVNSTAGK NLHLDVCGAC HPFYTGTQKV VDTGGRIDKF 
NKRFGMLGKK