Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3758 |
Symbol | rpmE |
ID | 4280651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4466787 |
End bp | 4466999 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638136571 |
Product | 50S ribosomal protein L31 |
Protein accession | YP_752424 |
Protein GI | 114564910 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAG GTATTCACCC AAATTACGCT GAAATCACTG CAACTTGTAC TTGTGGTAAC ATCATCAAAG TGAACTCAAC TGCAGGTAAA AACCTACACT TGGACGTATG TGGTGCATGT CACCCATTCT ACACTGGTAC TCAGAAAGTT GTTGATACTG GTGGTCGTAT TGACAAGTTC AACAAGCGTT TTGGTATGCT TGGTAAAAAG TAA
|
Protein sequence | MKTGIHPNYA EITATCTCGN IIKVNSTAGK NLHLDVCGAC HPFYTGTQKV VDTGGRIDKF NKRFGMLGKK
|
| |