Gene Sfri_3695 details

Gene Information

• Locus tag: Sfri_3695
• ID: 4280588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 4385928
• End bp: 4386653
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638136508
• Product: regulatory protein GntR, HTH
• Protein accession: YP_752361
• Protein GI: 114564847
• COG category: [K] Transcription
• COG ID: [COG2186] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTGG TTAACTTTAC CCCTGTCAAA CACATGAAGG CTTCCGATGA AATTGGAAAC 
CAGCTAAAGA ATGCTATTTT TGAAGGTAAA TATGTAGCTG GCGATAAACT ACCATCCGAA 
CGAGAACTTA TTGAGCTGTT TCAAATAAGC CGCACCGTTG TGCGAGAAGC AATTAAAGGA 
CTTGAAGCGA GTGGCCTTGT AGAAATTAAA CAAGGTGCGA TGGGTGGTGC TTTCGTAAAA 
CTGATGACAT TTGAACGACT GACTAATGTG TGTCAGGAAT TGTTCATCAT GGAAAAAATG 
TCATTCGCCG AAGTCTGCGA GGCACGATTA CAAATTGAAC CTATGGTCGC AAAATTAGCA 
GCGCAAAACT GCACACCAGA AATGGCAGAA AAATTGCGTG AAGCCTCACG CAATGAAGAA 
CACATATTAG ACTACCCTGA TACCGTTTAT TTACGTCAAA AAGTGCATTA TATTTTGGCT 
GACATGTCAG GGAATCGTTT TTTAGCTGCT ATCGTCAAAT CATTGCTACA AGTTATCAGT 
AATGCGACTA CAAAATTTGA ACCTAGCCAT GACAAAGTCC ATCCTGCGGG CCTGCATGAC 
GGTATTATTG AAGCCGTTAT TGCACAAGAC GGCCAACAAG CAGAGGCAGA AATGCGCGAA 
CACTTACAAG CATTTACCCT AAGACTTAAC GTTGTAGAAA AAGATTATAG AGACACTGAA 
AAATAG 

 

Protein sequence

MNLVNFTPVK HMKASDEIGN QLKNAIFEGK YVAGDKLPSE RELIELFQIS RTVVREAIKG 
LEASGLVEIK QGAMGGAFVK LMTFERLTNV CQELFIMEKM SFAEVCEARL QIEPMVAKLA 
AQNCTPEMAE KLREASRNEE HILDYPDTVY LRQKVHYILA DMSGNRFLAA IVKSLLQVIS 
NATTKFEPSH DKVHPAGLHD GIIEAVIAQD GQQAEAEMRE HLQAFTLRLN VVEKDYRDTE 
K