| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3692 |
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| Symbol | |
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| ID | 4280585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4382030 |
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| End bp | 4383283 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136505 |
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| Product | outer membrane porin |
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| Protein accession | YP_752358 |
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| Protein GI | 114564844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.844156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATGA AAACAAAACT ACTGCCTTTG GTTGTTGCAT GTCTCGCTGC AAGTCCAGCT
TTTGCGGCTG AGCCTATGGC CAACATATTT AATGACGGCA GTGTAAAAGG TCAATTTCAA
CTATTTGATT TTCAGCGTAA CTTTGATGGA GAAAGTACTG ACAGACGTGA TACATCATTT
GGTGGTCTGT TTTACTTGCG CTCTGGCGAA GCTAACGGCA TAAGCTTTGG CAGTTCATTT
GCTTCAGCTA ACCCAATTTG GGATGCAAAC GATGATGGTC TGTACGGACT TGTTGGTGGA
GGAGCACCAG GCTCTGTGGT AGAACGTACA TCAGTTAACC GTTTACAAGA ATACTTTGTT
AGCGGTAATT GGTATGACAC CAAAATAGTG GTTGGTGCTC AAGAGTTACG TACACCTATG
ATGAACCCGT TTCCATTAAG AGCAATCCCG TTCACGTATC GTGGTGCCAG TATTAAAAAT
ACCTCAATTG AGAACTTGGG CGTATCAGCA CTGTATATCA CTGACTACAT GGGTTGGACT
AACGAAGAGT TTGCTAGTGT GGCTGATGGT ATCCGAGGTG AATTTGCACG TAAGGGCGTG
TTCATCGATG TAGAAGACAA CCCTATTTAC GCTTTAGGTT TAGATTACAA TCTACCGTTA
GAGTCGGTAA AAGCTAAAAC TAGCTTGTGG TACTACTCAA TGGAAGATGT GTACAACCAG
TATCATGTTA AATTAGATAT GAGCGGTGAA ATGGGTGCCG CCAACTGGTA TTTCATTCCG
TCTTATTTAA AACAAGACTC TACAGGTCTG CTAGACCAAA GCGCTGCACA ATTCGACACT
TACCAAGCAG GCTTCCATTT AGGGATGAAA TGGAACGGAT TTGATGCCAC ATTTAAGTAT
GTGACCACTG GCGATGGCGA CGTAGTGGCT CCATTTGGCG ATGAAAAAGT GATTATTCAA
CAAGTGGTTC AGTCATCACG TGCTAACGAA GACGGCTACG GTGCTCAACT CGCTTATAAT
TTTTCACCCG ACTCAGCACT AAGCGGCGTT AGCACATATC TTAACTGGGC TAGCTATGAA
ATTGATGGCG ACTCAAGCAA AGACATCGAC GAAACCGACT TTTCAGTGGT GTACGACCTG
GCTAAATATG TCGACGGCCT GAGTGTACGC GCGCGTCACG CCATAGTTAA CTACTCAACT
GACGACGACT TAACTGACAC TCGTTTTTAC GTCTATTATA AATTTGCTTT GTAA
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| Protein sequence | MMMKTKLLPL VVACLAASPA FAAEPMANIF NDGSVKGQFQ LFDFQRNFDG ESTDRRDTSF
GGLFYLRSGE ANGISFGSSF ASANPIWDAN DDGLYGLVGG GAPGSVVERT SVNRLQEYFV
SGNWYDTKIV VGAQELRTPM MNPFPLRAIP FTYRGASIKN TSIENLGVSA LYITDYMGWT
NEEFASVADG IRGEFARKGV FIDVEDNPIY ALGLDYNLPL ESVKAKTSLW YYSMEDVYNQ
YHVKLDMSGE MGAANWYFIP SYLKQDSTGL LDQSAAQFDT YQAGFHLGMK WNGFDATFKY
VTTGDGDVVA PFGDEKVIIQ QVVQSSRANE DGYGAQLAYN FSPDSALSGV STYLNWASYE
IDGDSSKDID ETDFSVVYDL AKYVDGLSVR ARHAIVNYST DDDLTDTRFY VYYKFAL
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