| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3684 |
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| Symbol | |
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| ID | 4280577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4368385 |
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| End bp | 4370901 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136497 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein |
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| Protein accession | YP_752350 |
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| Protein GI | 114564836 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTA GAAGTTTTTT AAAAGCAAGT GCCGCACTGA GCTGTGTTGC AACTGTTACT
GGTTGTAACA CAAGTTCTGA TGATGCCAAT GTCATACCTC CGACACCGCC AGTCAGTGAT
GAAACCATTA CTTGGTCTGC GTGTTTAGTT AACTGTGGTT CAAATTGTCC TGTTAAGGTA
TTTAGCAGCG ATGGGATTAT CACGCGTGTT GAAGCGGATA ACGAAACGAC TGACGAGTAT
GGTGTTAATC ATCAAATTCG CGCTTGTGCT CGTGGACGTT CTTTACGACA ACGCACTTAT
GCTGCCGATC GTTTAAAAAC ACCGATGAAA CGTGTTGGTA AGCGTGGTGA AGGAAAATTT
GTACCCATAA GCTGGGATGA AGCAGCATCC ACTATTGCAA GTGAATTACA ACGTATTGCA
AATGAATACA GCAATAAGTC CATATTAAAG ATATATGGTA CAGGTGCTTA TTATGGATTC
TCTAGCTCAA GTTGTTTTAA TCGTGTGTTA AATCTCAATG GTGGTTTCCT GAATATTTAT
GGTAACTATT CGTGGGCACA ACAAACTGAA GCTGCCGCTG CAACAGGGTT TAGTAGTACT
TCAGGCTCTA ACTTGCTAGC ACTAAATGAT AGTGATTTAT TTATTGGCTT AGGCTATAAC
CCCAGTGAGA TGCGTCAGTC TGGATCTGGT GAAGGTTATG ACTTTTTAAA TGCACTGCAA
AAGAACAATG GTTTAGAAGT GATCATGATT GATCCTCGAT ATACCGACTC AATGGCTGGG
AAGGAGGATA ACTGGTTCCC AATTCGTCCA GGTACTGATG CAGCGCTATG TGAAGGTATT
GCCTATGAAA TGATTAGCTC TGGTTGGGTA GATAACCATT CTAAAAACTT TCTAGATAAA
TTCTGTGTTG GTTACGATAA AGAATCCTTA ATTAATTTAA AAGCTGAATT CGAAATCTCT
GAAGATCCTG AAAAAAAAGC ATATATCCCA TACATTAATC CTAATGATAA TTACAAAGAT
TATATTTTAG GTGAGGGTAC GTTTATTTCA ACTGGCCCTA AAACACCGAG CTGGGCAGCT
AAGATCTGTG GTATTTCTGA AACACATATT AAATCAATTG CGACAAAATT GATGAATGCT
CGTGCCCCAT TCATTGTTGC TGGTGCAGGT ATAAACCGAC ATGCGAATGG TGAACAAGCC
ATGCGATCTT GCTACATGTT ATCTTTCTTA ACGGGTAAGG TTGGTCAACC AGGTGTAAGT
AATGGTGCTC TTCCAAGTCA AGGAAGTCTC AGCCGAAGTG GAATGTCTGG CTTATCTAAC
CCGATCAAAG AATCCATTTC TTGCTTCACT TTTCCTGACG CAATAGAACG TGGTCATGAA
ATGACCACTC GAAAAGACGG GATTAGAGGA ACTGCTGACT TAGATACGCC ATTGGGCGCT
GATACAAAAG CAATTTTCGC GATTAATTCT AATGCGTTAA TTAATCAACA TTCAGATTCT
AATGGCATAG CTAAAATTCT TGAAGATGAA ACTAAATGTG AACTCATCGT CGTTTGTGAC
TGTTGGATGA CATCATCAGC TAAATTCGCT GACATTCTAC TCCCAGATAC CTCTTGGTTA
GAGTCAAACG ATTTAGTGAA TGACAGTTAT GCTTCGGGCA TCATGGGCTA CTTAGTTGCG
ATGAAAGCCG CCATTAAGCC GTTATGGGAA TGTAAATCAA TGTACGATAT GTGTGCTTTG
ATTGCTGAGA AAATGGGTAA ACTTGGCGAG TACACAGAAG GTAAAGATGA GGCCGGATGG
TTAACTGAGC TTTATGAAAA AACGCGTACA AATAGTAATA ATGCTAATGC AATTCCTCCT
CTTCCTAGTA CGTATGAAGA AGCACAAGCA CAAGGAGTCT TCCGTGCATT TGATGGTAAA
ACTGTCGTTG CATTAGAAGA CTATATAAAT GGCACCGATA CGCTAAATAC TCCATCAGGG
AAAATCGAAA TTTTCTCACT TGAGTTAGCT CAAAAGGGTA CAGACTGGGA ATTTGATAGC
ACAGTAAAAG GCAATTACAT TACTAGCATA CCTATGTACC AAGCGACTTG GGAAGGTTAT
GAGGACAGTG AAACATCAGA GGATTATCCA TTTCAATTAG TGGGTTATCA TACAAAAGGT
CGTACTCACT CTAGTTATCA TAATGTTCCT TGGTTACGTG AAGCTGTTGA AGATGCCGTT
TGGATGAATC CTGCAGATGC CTACAAGCAA GGCTTAACTC AAGGATCAAA AGCCCTTATT
TGGAGTCAAC GCGGTACTAT TGAACTCCCA GTCAGAGTAA CTCCTCGTGT TGCGCCAGGT
GTTCTCGCTC TTGGCCAAGG AGCTTGGTAC ACACCAGATC CTTCAGGAAG AGTCGGTCCA
TCTGGCCATA TTATTGATAT TGGTGGATGT ATTAACACTC TTACCCGTTA CCAGCCTAGC
CCTTTGGCAA AAGGTAATCC ACAGCACACA AATCGCGTAC AAATTGCTAG CGCTTGA
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| Protein sequence | MERRSFLKAS AALSCVATVT GCNTSSDDAN VIPPTPPVSD ETITWSACLV NCGSNCPVKV
FSSDGIITRV EADNETTDEY GVNHQIRACA RGRSLRQRTY AADRLKTPMK RVGKRGEGKF
VPISWDEAAS TIASELQRIA NEYSNKSILK IYGTGAYYGF SSSSCFNRVL NLNGGFLNIY
GNYSWAQQTE AAAATGFSST SGSNLLALND SDLFIGLGYN PSEMRQSGSG EGYDFLNALQ
KNNGLEVIMI DPRYTDSMAG KEDNWFPIRP GTDAALCEGI AYEMISSGWV DNHSKNFLDK
FCVGYDKESL INLKAEFEIS EDPEKKAYIP YINPNDNYKD YILGEGTFIS TGPKTPSWAA
KICGISETHI KSIATKLMNA RAPFIVAGAG INRHANGEQA MRSCYMLSFL TGKVGQPGVS
NGALPSQGSL SRSGMSGLSN PIKESISCFT FPDAIERGHE MTTRKDGIRG TADLDTPLGA
DTKAIFAINS NALINQHSDS NGIAKILEDE TKCELIVVCD CWMTSSAKFA DILLPDTSWL
ESNDLVNDSY ASGIMGYLVA MKAAIKPLWE CKSMYDMCAL IAEKMGKLGE YTEGKDEAGW
LTELYEKTRT NSNNANAIPP LPSTYEEAQA QGVFRAFDGK TVVALEDYIN GTDTLNTPSG
KIEIFSLELA QKGTDWEFDS TVKGNYITSI PMYQATWEGY EDSETSEDYP FQLVGYHTKG
RTHSSYHNVP WLREAVEDAV WMNPADAYKQ GLTQGSKALI WSQRGTIELP VRVTPRVAPG
VLALGQGAWY TPDPSGRVGP SGHIIDIGGC INTLTRYQPS PLAKGNPQHT NRVQIASA
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