| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3674 |
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| Symbol | |
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| ID | 4280567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4355323 |
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| End bp | 4357050 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136487 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_752340 |
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| Protein GI | 114564826 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC GCACACATTT ATTTTCTCTT CGTATCGGGC ATGCACTCCG AGAGTCTTTA
AAAGACGCTC CCTACAATGC CAATGCATTC ACTAAAGATT TATTAGCCGG CTTAACTGTT
GGCATTATTG CTATTCCATT AGCAATGGCG CTTGCGATTG CCATTGGGGT CGCGCCGCAA
TACGGGTTGT ATACTGCGAT TATTGCTGGG TTTGTTATTC CGCTCACCGG TGGCTCACGT
TATAGCGTGT CTGGCCCTAC CGCCGCATTT GTGGTGATCC TCTATCCCAT CGTGCATCAA
TATGGTCTGT CTGGTTTATT GCTGGCCAGC ATGTTATCCG GACTAATGTT GATTATCATG
GCGTTGTTTC GCTTAGGGCG TTATATCCAA TATATTCCCG AATCAGTCAC GTTAGGGTTT
ACGGGTGGTA TTGCCGTGGT GATTGCAGTG CTGCAAGTTA AAGACTTTTT TGGTCTAACT
ATTACCGAGA TGCCAGAAAG TTTTGTCGGT AAAGTAGCTA CCTTAGTTCA AGAAATTCCT
AGTTTTTCGG GGCCGACATT ACTGGTGGGA TTAAGCACAT TAGTGGTGTT TATTTTGTGG
CCAAAACTCA AGTTGGCGGT ACCCGCACAT CTTCCTGCAG TGGTTGTGGC GAGTATTGTG
GCGCTGGTAC TAAATCAACT CGGTTTTCAT GTGGCGACCA TTGGATCTAC GTTCAGTTTC
ACCCTAGCCG ATGGCTCAAT CGGTGCAGGT ATTCCCTCTA TGCTGCCTGA CTTTGAATGG
CCCTGGCTTC GCGCGCAATC GGGTGAAGTG CCATTGGTAC TCACTTGGCA ATTAGCCAGT
GACCTATTGT CTGCCGCCTT TGCTATCGCC ATGTTAGGTG CCATTGAATC GTTACTGTGC
GCAGTGGTGC TAGACGGCAT GTCAGGTAAA AAGCACAGCG CCAATAGCGA GTTACTTGGT
CAAGGTATCG GTAATATTAT CGCGCCATTT TTTGGCGGTA TTACCGCGAC TGCTGCCATC
GCTCGTTCGG CGGCTAACTA TAAGTCGGGG GCGGTAAGCC CAATCGCGGC CATGATCCAT
GCGCTGGTGG TGTTAGTGTC TTTATTATCG CTCAGCACTG TTTTAGCTTA TATCCCCATG
GCGGGCATGT CGGCGCTGCT TATTATGGTG GCTTGGAACA TGAGTGAAGC GCCTAAGATT
GTCCATCTTG TTAAAAAAGC CCCTGCCAGT GAAATACTGG TGTTGATGGT GTGCTTGTTA
CTGACCATAT TTTTTGACAT GGTGATTGCG ATCAGTGCTG GGATCATTTT GGCGTCGTTA
TTATTCATGA AACAAGTGGC CGACATGACC AAGGTGCAAG ACATTAGCGA GCAGAAAAAG
CACATTCATG TTGAGTTACC GCCACGCTGG AAAGTGTTTA AAATTAATGG GCCATTGTTT
TTTGCTGCTG CCGACAGTGT GTTTGGTGAG TTGGCGCATT TGAGTGGCGA CCAGGATGGG
GTGGTGTTGT ATTTTGACGG GGTGTCTATT TTAGACTCTG GTGGCGTTTC GGCGCTGTAT
AAGTTTATTG ATAAATGTAA GCGTGATAAT ACTCGAGTCT TGTTGGCCGA TTTTCAATTT
CAGCCACTTA AAACCTTAGC CAAAGCAGGG TTTAAGCCAG ATGGTGTGCA ATGTGTGACA
TATTCTACGC TGGCAGATGC ACTTGATGAT GTGGTGGCTG GAGCTTAA
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| Protein sequence | MKYRTHLFSL RIGHALRESL KDAPYNANAF TKDLLAGLTV GIIAIPLAMA LAIAIGVAPQ
YGLYTAIIAG FVIPLTGGSR YSVSGPTAAF VVILYPIVHQ YGLSGLLLAS MLSGLMLIIM
ALFRLGRYIQ YIPESVTLGF TGGIAVVIAV LQVKDFFGLT ITEMPESFVG KVATLVQEIP
SFSGPTLLVG LSTLVVFILW PKLKLAVPAH LPAVVVASIV ALVLNQLGFH VATIGSTFSF
TLADGSIGAG IPSMLPDFEW PWLRAQSGEV PLVLTWQLAS DLLSAAFAIA MLGAIESLLC
AVVLDGMSGK KHSANSELLG QGIGNIIAPF FGGITATAAI ARSAANYKSG AVSPIAAMIH
ALVVLVSLLS LSTVLAYIPM AGMSALLIMV AWNMSEAPKI VHLVKKAPAS EILVLMVCLL
LTIFFDMVIA ISAGIILASL LFMKQVADMT KVQDISEQKK HIHVELPPRW KVFKINGPLF
FAAADSVFGE LAHLSGDQDG VVLYFDGVSI LDSGGVSALY KFIDKCKRDN TRVLLADFQF
QPLKTLAKAG FKPDGVQCVT YSTLADALDD VVAGA
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