| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3646 |
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| Symbol | |
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| ID | 4280539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4325520 |
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| End bp | 4325906 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136459 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_752312 |
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| Protein GI | 114564798 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGATG AACAATACCA AAAAGGGCTT GAGGTACGTC GCCAGGTAAT GGGGGACGCT
TATGTCGATA AAGCGCTTAG TAATGTCACT GATTTTACTC AACCATTGCA AGCGTTAGTC
ACTGCAAATT GTTGGGGAGA AGTGTGGGTG CGAGATGCTA TTTCTAAGCA AACGCGCAGC
CTAATCACTA TTGCAACACT GGCAGCATTA AAGGCACCCA CTGAATTAAA GGGCCATGTT
CGTGGGGCAT TACGTAATGG ATGTTCTATT GAAGAAATTC AGGAAGTATT GCTGCATTCA
ACCGTTTATT GCGGCATGCC GGCTGGTATT GAGGCTTTTC GGGCAGCGAA AGAAGCCATT
GAGGAATGGC AGCTAGAGAA TAGCTAG
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| Protein sequence | MNDEQYQKGL EVRRQVMGDA YVDKALSNVT DFTQPLQALV TANCWGEVWV RDAISKQTRS
LITIATLAAL KAPTELKGHV RGALRNGCSI EEIQEVLLHS TVYCGMPAGI EAFRAAKEAI
EEWQLENS
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