Gene Sfri_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3630 
Symbol 
ID4280523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4308330 
End bp4308959 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID638136443 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_752296 
Protein GI114564782 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACAA AATTAGCGAA TCCGGCACCA TTAGGATTAA TGGGCTTTGG CATGACAACC 
ATACTGCTCA ATATCCATAA TGCTGGCTAT TTTCCAATTG ATTCGATGAT CCTCGCAATG 
GGGATTTTCT ACGGTGGCAT TGGCCAAGTT ATTGTCGGTA TGATGTGCTT TATGCGTGGC 
GACACTTTCG GCACCACCGC GTTTACTTCA TACGGCTTAT TTTGGTTAAC CTTAGTGGGT 
ATTATCTTAA TGCCAAATAT GGGCATAGCC GCCAGTCCTG CACACTTTAT GGGGTGGTAT 
CTAACGCTAT GGGGCACCTT TACTGCCTTT ATGTTTGTAG GATCGTTACG TTATCCACGA 
GCAAAACAAG TAGTATTTGG TTCATTAACT ATCTTGTTTT TCTTATTGGC CGCTCGTGAC 
TTTACCGATA ATGCGTTGCT TGGCACGATT GCAGGTTTTG AAGGTATTTT TTGCGGAGCA 
AGCGCCATTT ACTTTGCCAT GGCCCAAGTG CTTAATGCTG AATACGGCCG AACTATTTTA 
CCTGTTGGAG AGTTAACTCA GTCTAACACT CAGGTTCAGC CCCAAACAGC TGAAGCAGAA 
AAAGTGACCT TACACTCGGT TAAAGCATAA
 
Protein sequence
MSTKLANPAP LGLMGFGMTT ILLNIHNAGY FPIDSMILAM GIFYGGIGQV IVGMMCFMRG 
DTFGTTAFTS YGLFWLTLVG IILMPNMGIA ASPAHFMGWY LTLWGTFTAF MFVGSLRYPR 
AKQVVFGSLT ILFFLLAARD FTDNALLGTI AGFEGIFCGA SAIYFAMAQV LNAEYGRTIL 
PVGELTQSNT QVQPQTAEAE KVTLHSVKA