| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3586 |
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| Symbol | |
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| ID | 4280479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4260376 |
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| End bp | 4263564 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136398 |
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| Product | heavy metal efflux pump, CzcA family protein |
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| Protein accession | YP_752252 |
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| Protein GI | 114564738 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATATA AATTAATTGA GATTGCCGTT GAAAAGCGGT TATTGGTGTT ACTTGGATTA
CTGGCCACTG TGGTGGCATC GGTATTCATG TTACCGAAGT TAAATCTAGA TGCGTTTCCG
GATGTCACCA ATGTGCAGGT GACCATTAAT ACTGAAGCGG AAGGGTTGGC GGCAGAAGAG
GTCGAGAAGC TGATTAGCTA TCCTGTCGAA TCGGCAATGT ATGCATTACC GGCGGTGACC
GAGGTGCGTT CATTATCACG TACTGGTTTA TCGTTAGTGA CAGTGGTGTT TGCCGAAGGT
ACCGATATTT ATTTTGCACG TCAGCAAGTG TTTGAACAAC TGCAAGCTGC AAAAGAGTCG
ATTCCTGCGG GTGTCGGTAA CCCTGAAATT GGCCCGAATA CCTCTGGTTT AGGGCAAATT
TATCAATACA TTTTACGGGC TGAACCCGAA ACCAATATCA GCGCATCTGA GCTGCGGAGC
TTAAATGACT ATTTAGTGAA GTTGATATTA ATGCCGGTGA GTGGGGTGAC TGAGGTGCTG
TCGTTTGGCG GCGAGGTGTT GCAATACCAA GTGCAAGTTG ATCCTAATAA ACTGCGCAGT
TATGGCTTGT CGATGAGCCA AGTTAGCCAA GCATTGGAAA GTAATAACCG TAATGCTGGT
GGTTGGTTTA TGGACCAAGG CCAGGAGCAA TTAGTGGTTC GTGGTTATGG TTTGTTGCCC
GCTGGCGACG CAGGTTTACA GGCCATTGCC GACATTCCGT TAACCGAAAT CAATGGCACG
CCAATACGAG TGGCCGACAT TGCTAATGTG GCTTTTGGTA GCGAAATAAG AGTCGGTGCA
GTGACCATGT CGCGTAGGCA AGCAGCGGCT AATGGCTCGT CGTCCGATGT ACAAGCGCTA
GGTGAAGTGG TTGCAGGCGT TGTGCTTAAA CGCATGGGCG CCAATACCAA AGCCACTATT
GACGACATCA ATTCACGTAT TAGTTTAATT GAACAATCCT TGCCAAAAGG AGTGTCATTT
GAGGTGTTTT ACGACCAGGC GGATTTAGTC GATAAAGCGG TCACTACTGT GGTTGAAGCG
CTATTGATGG CCTTTGGGTT TATCGTGATT ATTTTGGCGT TGTTTCTGGT CAATATACGG
GCGACATTGT TGGTATTACT GTCGATCCCA GTGTCGATCG GGATCGCGTT ATTGATCATG
TCTTATTACG GCATGTCAGC TAACTTAATG TCTTTAGGTG GTCTTGCTGT CGCGATCGGT
ATGCTAGTTG ATGGTTCAGT GGTGATGGTC GAAAACATCT TTAAACATGT TAGTGGCGAA
ACTGGCGCCA ACCAATCTAC TGAAGCTCAT GTTGATAGTG AATCAGAATC TCAAACCCAA
AGCATGGCGA TTAGGATCAT GCTGGCGGCA AAAGAAGTGT GCAGTCCTAT CTTCTTTGCA
ACAGCGATTA TCATCGTAGT ATTTATGCCG TTATTTGCTC TTGAAGGTGT AGAGGGTAAA
TTATTTCAAC CTATGGCCGT GAGCATTATT CTCGCCATGA TGGCGGCATT AGTGGTGGCG
TTATTTGCGG TGCCTGCATT GGCGGTGTTT CTATTTAAAC GCGGTATTGT AGTGCGTCAA
AGCAAAGTGT TGGCCCCCAT TGACGCAGTC TATCGACGAG TACTCACGCT AGTGTTATCA
AGCCCTAAAT CGGTGATGTT AGCGGCAGTT GTTTTGTTTG CTGCAAGCAT GCTGTTATTG
CCAAAGCTAG GCACTGAATT TGTGCCTGAA TTAGAAGAGG GCACCATCAA CTTACGGGTG
ACACTGGCGC CTACAGCCAG TTTGGCCACT TCGGTTAACG TCGCGCCTAA AATTGAAGCC
ATGCTGCTTG AGTTTCCCGA GGTGGAATAT GCGTTAAGTC GAATCGGGGC TCCCGAACTT
GGCGGCGACC CTGAACCTGT GAGTAATATT GAAATATATA TTGGCCTTAA GCCGATAGAG
CAATGGACAT CGGCAAGTTC GCGCTTTGAG CTACAGCGTT TGATGGAGCA ACGGCTAGCG
ATATTCCCAG GATTATTGTT AACCTTCTCA CAACCGATAG CGACTCGAGT CGATGAGTTG
TTATCGGGCG TTAAAGCGCA GTTAGCGATT AAGATATTTG GCCCCGATTT GAGCATATTG
TCGGAAAAAG GTCAGGTGTT AACCGATTTA GTCGCTGCCA TTCCTGGGGC GGTTGATGTG
TCGCTAGAAC AAGTCAGCGG TGAAGCTCAG TTAGTGGTTC GACCTAAACG TGAAGTACTC
GCTCGCTATG GTATTAGCGT CGATGAAGTC ATGAGTTTAG TCACTCAAGG TATTGGTGGT
GCCAGTGCTG GCCAAGTGAT TGATGGTAAC GCCCGTTATG ACATTAATCT ACGATTAGCA
GCGCAATATC GTAATGCGCC AGATGCGATT GAAGACTTGC TACTCAGTGG TGCTAATGGC
GCGATTGTAC GCTTGGGCGA TCTCGCTGAT GTGGTGATTG AAATGGCGCC GCCGAATATT
CGTCGTGACG ATGTACAGCG CCGAGTGGTG GTGCAGGCTA ATGTATCGGG GCGTGACATG
GGTTCGGTGG TCAACGATAT TTATGCCATT GTGCCGCAAG CGGAGTTACC TGCGGGCTAT
ACGGTTGTGG TGGGCGGCCA ATATGAAAAC CAGCAACGGG CGCAACAAAA GCTAATGTTG
GTGGTGCCCA TTTCTATCGG ACTTATTGGT TTATTGTTGT ATTTCTCGTT TGGTTCACTC
AAACAGGTGG CATTGATTAT GGCTAACGTG CCATTGGCAT TAATCGGCGG CGTGGTGGCT
TTATATGTCA CTGGCACCTA TTTGTCGGTG CCCAGTTCAA TCGGTTTTAT CACCTTGTTT
GGTGTTGCTG TGTTGAATGG TGTGGTGCTG GTGGACTCGA TTAACCAACG TAGACAGTCA
TCAGATGAAA GTCTGTACGA CAGTGTTTAT CAAGGCACGG TAGGGCGGTT ACGACCGGTG
TTAATGACGG CACTCACCTC TGCATTGGGG CTGATCCCTA TCTTGTTATC ATCTGGTGTG
GGCAGTGAAA TTCAACAACC ATTAGCGGTG GTGATCATTG GCGGCTTGTT TAGCTCAACT
GCTTTGACTT TACTGGTGTT GCCGACGGTT TATCAGTGGT TGTATCGAGA TAAGTTATTA
TCGAAATAA
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| Protein sequence | MLYKLIEIAV EKRLLVLLGL LATVVASVFM LPKLNLDAFP DVTNVQVTIN TEAEGLAAEE
VEKLISYPVE SAMYALPAVT EVRSLSRTGL SLVTVVFAEG TDIYFARQQV FEQLQAAKES
IPAGVGNPEI GPNTSGLGQI YQYILRAEPE TNISASELRS LNDYLVKLIL MPVSGVTEVL
SFGGEVLQYQ VQVDPNKLRS YGLSMSQVSQ ALESNNRNAG GWFMDQGQEQ LVVRGYGLLP
AGDAGLQAIA DIPLTEINGT PIRVADIANV AFGSEIRVGA VTMSRRQAAA NGSSSDVQAL
GEVVAGVVLK RMGANTKATI DDINSRISLI EQSLPKGVSF EVFYDQADLV DKAVTTVVEA
LLMAFGFIVI ILALFLVNIR ATLLVLLSIP VSIGIALLIM SYYGMSANLM SLGGLAVAIG
MLVDGSVVMV ENIFKHVSGE TGANQSTEAH VDSESESQTQ SMAIRIMLAA KEVCSPIFFA
TAIIIVVFMP LFALEGVEGK LFQPMAVSII LAMMAALVVA LFAVPALAVF LFKRGIVVRQ
SKVLAPIDAV YRRVLTLVLS SPKSVMLAAV VLFAASMLLL PKLGTEFVPE LEEGTINLRV
TLAPTASLAT SVNVAPKIEA MLLEFPEVEY ALSRIGAPEL GGDPEPVSNI EIYIGLKPIE
QWTSASSRFE LQRLMEQRLA IFPGLLLTFS QPIATRVDEL LSGVKAQLAI KIFGPDLSIL
SEKGQVLTDL VAAIPGAVDV SLEQVSGEAQ LVVRPKREVL ARYGISVDEV MSLVTQGIGG
ASAGQVIDGN ARYDINLRLA AQYRNAPDAI EDLLLSGANG AIVRLGDLAD VVIEMAPPNI
RRDDVQRRVV VQANVSGRDM GSVVNDIYAI VPQAELPAGY TVVVGGQYEN QQRAQQKLML
VVPISIGLIG LLLYFSFGSL KQVALIMANV PLALIGGVVA LYVTGTYLSV PSSIGFITLF
GVAVLNGVVL VDSINQRRQS SDESLYDSVY QGTVGRLRPV LMTALTSALG LIPILLSSGV
GSEIQQPLAV VIIGGLFSST ALTLLVLPTV YQWLYRDKLL SK
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