Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3568 |
Symbol | |
ID | 4280461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4238576 |
End bp | 4239217 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136380 |
Product | hypothetical protein |
Protein accession | YP_752234 |
Protein GI | 114564720 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3531] Predicted protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.149179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACA CAACCCTTTA TTATGTTCAC GATCCAATGT GCAGTTGGTG TTGGGGATAC CGCCCCACAT GGGATGCTCT GCAAGTTCAA CTACAACAGC AGTTTGGCCA GCAATTGAGT CTACACTATC TAGTCGGTGG TTTAGCGCCC GACTCAGCAG AACCAATGCC ACACCCCATG CAGCAAATGC TACAACAAAC CTGGCATAAG ATTAACCAAC AATTAGGTAC AGAATTTAAT CACGACTTTT GGCAGCTCTG CCAACCAAGG CGTTCAACGT ATCCAGCATG CAGAGCCAGC ATAATTGCTC GCCAATATGG GCTTGAGCAA CAGATGATCA ACGCTATCCA ACAGGCTTAT TATCTTAATG CACACAACCC ATCTGATGTT GATACTTTAG TATCGATTGC GACTCAATTA GGGATCCCTG CAGACTTATT CACAGAGCAA TTAAACGCTG ATGAAACAGA AGATAAATTG CTCAAAGAAA TCAATTTTGC TCGCCAACTT CCCATTCAAG GATTCCCCTC ATTAGTGCTT ATGGTCGATA ACAACGCCTA CCCTATTAGG CTTGATTATC ATCAATGGCA AACCAGTTTG GCAGACATAC AAACAATCTT GTTAACAGCC CAACCGAGTT GA
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Protein sequence | MANTTLYYVH DPMCSWCWGY RPTWDALQVQ LQQQFGQQLS LHYLVGGLAP DSAEPMPHPM QQMLQQTWHK INQQLGTEFN HDFWQLCQPR RSTYPACRAS IIARQYGLEQ QMINAIQQAY YLNAHNPSDV DTLVSIATQL GIPADLFTEQ LNADETEDKL LKEINFARQL PIQGFPSLVL MVDNNAYPIR LDYHQWQTSL ADIQTILLTA QPS
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