Gene Sfri_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3568 
Symbol 
ID4280461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4238576 
End bp4239217 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID638136380 
Producthypothetical protein 
Protein accessionYP_752234 
Protein GI114564720 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.149179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACA CAACCCTTTA TTATGTTCAC GATCCAATGT GCAGTTGGTG TTGGGGATAC 
CGCCCCACAT GGGATGCTCT GCAAGTTCAA CTACAACAGC AGTTTGGCCA GCAATTGAGT
CTACACTATC TAGTCGGTGG TTTAGCGCCC GACTCAGCAG AACCAATGCC ACACCCCATG
CAGCAAATGC TACAACAAAC CTGGCATAAG ATTAACCAAC AATTAGGTAC AGAATTTAAT
CACGACTTTT GGCAGCTCTG CCAACCAAGG CGTTCAACGT ATCCAGCATG CAGAGCCAGC
ATAATTGCTC GCCAATATGG GCTTGAGCAA CAGATGATCA ACGCTATCCA ACAGGCTTAT
TATCTTAATG CACACAACCC ATCTGATGTT GATACTTTAG TATCGATTGC GACTCAATTA
GGGATCCCTG CAGACTTATT CACAGAGCAA TTAAACGCTG ATGAAACAGA AGATAAATTG
CTCAAAGAAA TCAATTTTGC TCGCCAACTT CCCATTCAAG GATTCCCCTC ATTAGTGCTT
ATGGTCGATA ACAACGCCTA CCCTATTAGG CTTGATTATC ATCAATGGCA AACCAGTTTG
GCAGACATAC AAACAATCTT GTTAACAGCC CAACCGAGTT GA
 
Protein sequence
MANTTLYYVH DPMCSWCWGY RPTWDALQVQ LQQQFGQQLS LHYLVGGLAP DSAEPMPHPM 
QQMLQQTWHK INQQLGTEFN HDFWQLCQPR RSTYPACRAS IIARQYGLEQ QMINAIQQAY
YLNAHNPSDV DTLVSIATQL GIPADLFTEQ LNADETEDKL LKEINFARQL PIQGFPSLVL
MVDNNAYPIR LDYHQWQTSL ADIQTILLTA QPS