Gene Sfri_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3532 
Symbol 
ID4280425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4202007 
End bp4202279 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content39% 
IMG OID638136344 
Producthistone family protein DNA-binding protein 
Protein accessionYP_752198 
Protein GI114564684 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA GTGAATTAAT TGCAAAAATC GCTGAAAATG CGGAACTAAC TAAAGCTGAA 
GCTGGCCGCG CACTAAAATC TTTCGAAGAA GCGGTAACTG AAGCCATGAA AAATGGTGAT
AAAATTTCTA TTGTTGGTTT TGGTTCTTTT GAAACCACTC AACGTGCCGC ACGTACTGGC
CGTAACCCGC AAACTGGCAA AGAAATTCAA ATTGCTGCAG CTACTGTGCC TAAGTTTAAA
GCTGGTAAAA CACTAAAAGA TAGCGTTAAT TAA
 
Protein sequence
MNKSELIAKI AENAELTKAE AGRALKSFEE AVTEAMKNGD KISIVGFGSF ETTQRAARTG 
RNPQTGKEIQ IAAATVPKFK AGKTLKDSVN