| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3492 |
|---|
| Symbol | |
|---|
| ID | 4280386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4154174 |
|---|
| End bp | 4154581 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638136305 |
|---|
| Product | transcriptional regulator, MerR family protein |
|---|
| Protein accession | YP_752159 |
|---|
| Protein GI | 114564645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02051] Hg(II)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTG TCTCACTTGA AAAGAAAAGA ACCATCAGTA AGCTGGCCAA TGAGCTTGGT
ATCAATATTG AGACGGTGCG TTTTTATGAA CGACGAGGAA TGATCGAGCA ACCACTGAAG
CCAGACCTGG GTTACCGTCA TTACCCAAAT GAAACGGTGA ACCGTATTCG CTTTATCAAA
CGAGCCAAGG AGTTGGGATT TACGCTGGAG GAAATTGCTA ATCTATTGAG CCTAGAGGAT
CGCCCATGCA GTCAAGTCCA AGAGCTTGCC GAGCATAAAC TTGGCGCCGT CAGAGAAAAA
ATGGTTGATT TACGACGCTT GGAAACCGCG CTTAATACAC TGTTGCTACA GTGCCATAAC
AATGAAGATG ACAGCCATTG CCCCATTATC GATTCCTTGC AACCCTGA
|
|---|
| Protein sequence | MTSVSLEKKR TISKLANELG INIETVRFYE RRGMIEQPLK PDLGYRHYPN ETVNRIRFIK
RAKELGFTLE EIANLLSLED RPCSQVQELA EHKLGAVREK MVDLRRLETA LNTLLLQCHN
NEDDSHCPII DSLQP
|
|---|
| |