Gene Sfri_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3477 
Symbol 
ID4280373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4138049 
End bp4138639 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content44% 
IMG OID638136292 
Productresolvase domain-containing protein 
Protein accessionYP_752146 
Protein GI114564632 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAG TTGGTTATGC TCGAGTGAGT TCTACGGGTC AAAGCTTAGA AGTGCAACTG 
GGCAAGTTAC ATCGAGCTGA GTGCAATAAG ATATATCAAG AAAAACGCAG TGGGAGGACG
GCTGAACGGT CTGAATTTCA ATCTTGCATG AGTTATTTAC GTGAAGGGGA TACCCTAGTG
GTAACACGAC TCGATCGTCT TGCTCGCTCA GTCGTACACT TAGCCCAGAT TGCTTCGCGT
TTTCAAAGTG AAGGCATTGA TTTACTCGTT ATCGATCAGA ACATTGATAC GAGCACTTCG
ACTGGGAGAC TCATGTTCAA TATGTTGGCT GCGATTGCTG AGTTTGAAAA TGACTTGCGG
ACAGAGAGAC AGGCCGAAGG TATCGCAAAA GCACATGAAA ATGGGGTTAA ATTTGGTAGA
CCTGTAAAAC TCACGGATAC CTTAAAACAG GCTATTTATG ATAAAAGAGC TGAGGGGGCC
ACCATTGGGC AGCTTGCCAA GGAGTATCAC CTTGGAGAAG CCTCTATTTA TCGGGCACTG
AATTCTGTGA AGAGCACACA AGAAATTACA AGTAAACTTA TAAGTAATTG A
 
Protein sequence
MSKVGYARVS STGQSLEVQL GKLHRAECNK IYQEKRSGRT AERSEFQSCM SYLREGDTLV 
VTRLDRLARS VVHLAQIASR FQSEGIDLLV IDQNIDTSTS TGRLMFNMLA AIAEFENDLR
TERQAEGIAK AHENGVKFGR PVKLTDTLKQ AIYDKRAEGA TIGQLAKEYH LGEASIYRAL
NSVKSTQEIT SKLISN