Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3462 |
Symbol | |
ID | 4280359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4116070 |
End bp | 4118475 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638136278 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_752132 |
Protein GI | 114564618 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAT GCGCTTCAAA GGGGTGTGGC TGCACGACTG AGCCGATCAT CCAACCCACG GCACCGGCCC CGCTGGCAAC CGGATCGGCT CAAGCGGTGT ACCGCATCGA GAACATGGAT TGCCCGACCG AAGAGGCGCT GATCCGAAGC AAACTGGCCG GTCTGGCGGG GGTGGCGGGT CTTGAATTCA ACCTGATGCA ACGTACCTTG GCCGTGCGAC ACGAATTGCC TTCGTTGTCT CCCGTCGAGC AGGCGCTGAA GGCCATCGGC ATGCAAGCTG TGCGCATGGA TCAGGCGTCG GCCGAGCAGA CGACCAAGCT GTCCATTGCC AAGATGGATT GCCCGACCGA AGAGACGTTG ATCCGCAACA AGCTCGGCAC CGTGGCCGGT GTTGCTGATC TCGATTTCAA CCTGATGCAG CGCACGCTGT CGGTACGCCA TGCGAACCAG GTTCTGCCAG ACGTGCTCGT GGCACTGCAA GCGCTTGGAT TCGAGGCGCA GGTCGTGGAC ACGGCAGAGG TCGCATCTCC ATCCGCCGCC CCTGTGACCA CGCCGACCAA CTGGTGGCCG CTGGGCATCT CCTTGGTCAC TGCATCGGCG GCCGAGGCGG TCTACTGGCT CCACAACGGC AATCACTGGT CGGTTGTCGT TCTGGCGCTT GTCGCGGTCT TCACGGGTGG CCTCTCCACC TACAAGAAGG GGTGGATTGC GCTCAAGAAC CGTAATCTCA ACATGAACGC CCTCATGTCG ATTGCGGTCA CGGGTGCCAT GTTGATCGGC CACTGGCCCG AAGCGGCAAT GGTGATGGTA CTGTTCGCGC TGGCCGAGGT AATCGAAGCC AAATCGCTGG ATCGCGCTCG TAACGCTATC CGTGGCCTGC TCGACCTGAC CCCGGAACAG GCCACGGTAC AGCAGGCTGA CGGCACATGG CGCGAGGTGG GCGCCAAGCA AATCACCATC GGCGCCCGCG TCCGGGTCAA ACCAGGTGAG CGCATCGCCC TTGATGGTGA GGTGCTGGAA GGCCGCTCTG CCGTCAACCA AGCCCCGATC ACGGGTGAAA GCCTCCCGGT CGAAAAATCC CCCGGTGATT CGGTGTTCGC TGGCACGATC AACGAATCCG GCTCGTTCGA GTACCGCGTC ACCGCCTTGG CCAACAACTC CACTTTGGCC CGGATCATTC ACGCGGTAGA GGCTGCGCAA GGTAGTCGTG CGCCGACTCA GCGTTTTGTC GATCAGTTCG CCCGCTGGTA CACCCCCGTT GTATTCGGCG TTGCCATCGC CGTCGCGTTG TTGCCGCCGC TGTTCATGGG TGCGGCATGG CTCGACTGGA TCTACCGTGC ATTGGTTCTG CTGGTGGTCG CCTGCCCGTG CGCACTGGTG ATCTCTACAC CGGTCAGCAT CGTCAGCGGC CTGGCCGCCG CCGCCCGCCA CGGCATTCTC ATCAAAGGTG GCGTCTATCT GGAAGAAGGC CGCAAGCTGC GCTGGCTGGC TCTGGACAAG ACCGGCACGA TCACGCACGG CAAGCCCGCA CAGACCGACT TTGTCACATG GGGCAATGCA CTCGCCTCGG ACAGCCGCAG CATCGCTGCC AGTCTGGCGG CCCGCTCGGA CCATCCTGTA TCCAAGGCGG TGGCACAGGC CGCGCAGACG GACGGGGTTG CCTTGCTCGA CGTGGCCGAA TTCAACGCGC TGCCCGGTCG GGGTGTGCAG GGCCAAATCA ACGGTGAAAC CTACCATCTT GGCAACCAGC GGATGCTAGA AGAGCTGGGG CAGCGTACTC CCGAGCTGGA ACAGCGCATC GCGGCGCTGG AAACCATGGG TAAAACTGTC GTGATGTTGG TCAGCGCAAA AGGGGTTCAT GCCTTATTTG CCGTAGCGGA CACCATCAAG GAAAGCAGCA GGAGCGCCAT TGCCGAGCTT CATGCACTGG GCATCAACAC CATGATGCTG ACCGGCGACA ACCCCCACAC GGCACAGGCC ATTGCCGCAC AAGCCGGGAT CGACCGTGCG CAAGGCAATC TGCTCCCAGA CGACAAACTG CGCGAAGTTG AGCTACTGGC CATAAAGGGC AAGGTCGGCA TGGTCGGTGA TGGCATCAAC GATGCCCCGG CCTTGGCGCG TGCGGACATC GGCTTTGCCA TGGGAGCGGC TGGCACAGAT ACCGCCATCG AGACCGCTGA CGTGGCCCTG ATGGACGACA ACCTGGGCAA GATTCCGACC TTCGTGCGCC TGTCGCGTGC GACGGCGCAG GTGCTGATGC AAAACATTGT GCTGGCCCTT GGCATCAAGG CAGTATTTCT GGTGCTGACC TTCACGGGTC AAGCGACCAT GTGGATGGCG GTGTTTGCTG ATATGGGGGC CAGCTTGCTC GTCGTTGGCA ATGGCTTGAG GCTGTTGCGC AAATGA
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Protein sequence | MSECASKGCG CTTEPIIQPT APAPLATGSA QAVYRIENMD CPTEEALIRS KLAGLAGVAG LEFNLMQRTL AVRHELPSLS PVEQALKAIG MQAVRMDQAS AEQTTKLSIA KMDCPTEETL IRNKLGTVAG VADLDFNLMQ RTLSVRHANQ VLPDVLVALQ ALGFEAQVVD TAEVASPSAA PVTTPTNWWP LGISLVTASA AEAVYWLHNG NHWSVVVLAL VAVFTGGLST YKKGWIALKN RNLNMNALMS IAVTGAMLIG HWPEAAMVMV LFALAEVIEA KSLDRARNAI RGLLDLTPEQ ATVQQADGTW REVGAKQITI GARVRVKPGE RIALDGEVLE GRSAVNQAPI TGESLPVEKS PGDSVFAGTI NESGSFEYRV TALANNSTLA RIIHAVEAAQ GSRAPTQRFV DQFARWYTPV VFGVAIAVAL LPPLFMGAAW LDWIYRALVL LVVACPCALV ISTPVSIVSG LAAAARHGIL IKGGVYLEEG RKLRWLALDK TGTITHGKPA QTDFVTWGNA LASDSRSIAA SLAARSDHPV SKAVAQAAQT DGVALLDVAE FNALPGRGVQ GQINGETYHL GNQRMLEELG QRTPELEQRI AALETMGKTV VMLVSAKGVH ALFAVADTIK ESSRSAIAEL HALGINTMML TGDNPHTAQA IAAQAGIDRA QGNLLPDDKL REVELLAIKG KVGMVGDGIN DAPALARADI GFAMGAAGTD TAIETADVAL MDDNLGKIPT FVRLSRATAQ VLMQNIVLAL GIKAVFLVLT FTGQATMWMA VFADMGASLL VVGNGLRLLR K
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