Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3442 |
Symbol | |
ID | 4280340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4093917 |
End bp | 4095719 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136259 |
Product | phage integrase family protein |
Protein accession | YP_752113 |
Protein GI | 114564599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGA TTGAGTTGAT ACTAACGGAC GTTGAGTTTG CGGAGCAGCA ATGTTCAAAG CCTAATCAAA GCACACTAGA GCGAGCGATT GATGGCACCC TGACGGGCAT TGTAACCTAT GTAAAGTTAG CCAACGGTCA CTATCAAGTT TACTCTCGAT ATGAAGAAGA ACTATGGAAA TTTCCTGCTG CTAAAGGGAC TAAAGGCACC ACCAAAAGTA ACCTTACACT TAATTTTGGC ACAATAAATA ACCCTGAAAT GAAACAAATG GCAAAATGGG TCATATGGAA TAAATTAAAA GAAGGATTAG CGGTCAACTC TTTACTACAT TCTTTAAGTT CTCTTAAAGG CTACTTTAAA TGGGCCTTGA GTTCAGACAC AACTGCAACG CATGGCTTGA CTGCTTTTAC CTCTAGTGCT TATGTTAAGT ATGTGAATAG ACTAAGCGCA AAGCGGAATG GCGAAATAAA GCCTCTTTCG TTAACAACAA AAACGCTTAA GTTCCTCGCA GTGGAAAACC TTTATCAGTG TTGCAAAGCA TTTTATTTTG TTAAAGAGCA TCCTTGGCCT GGTTCTGGTG CCAATATGCA GGCAGGACTG ATTGGAGAGG CCGCTCAAAA AGCGAAAACC AAACCCAAAA CCCCTATCAT CCCTAACGAA GTGCTAATTC CACTCTGTAA GTTTACAAAG TCATGTTTAG ACAGGGCTGA TGAAATTTTG GCATCAAAAG GTAAGCGTGA ATCATTACTG CTGCGAGACA GTTGCATCTT CTGGTTGCTA CTCACAACAG GTATGCGTAT CCATGAGGTT TTAGGTATTA AACGCGGAGC GTATCGCAGT GAGACAAGAG ATGAGGTGAC GTATTACTAC ATTGAAACCG CGTCAGAGAA GACCCATACG GGATTAGCTG AATGGATTGC GCCAGAGATT GCAACTCAAG CTATCGACAT TCTTGGTCGT TATAGTGCGC CATTGCAAAA GCAGCTTGAA AATGACTTAT CAAAAGCAAG GGATAGTCAA GACCATGTGG AAGTTAATAG GCTAGAACAA ATCTCAGACC ATATTTGTTT GTCGGTATCT AAAAAAAGTA ACGCTATTAG CCTGTTGTCT GGATGTACAA TTACTGTTCA TAGGTTGCCT AATTTATGTC AACAGATAGA TTGCAACTGG AATTTGTCAG CGCACCAGTT TCGCCGCACC TTTGCCAACT ATGCAGTGCA TTCTGAATTG GGTGATTTAA GGGCACTAAA AGACCATTTT AAACACTGGT CAATCACCAT GACGGCTCTG TATGCCTTTA ACGAAGATTT AGACGCAGAA TTATTCGAAG AACTGCTCCG AGAAAAGTAT TTGATCGAAG AAGAAATCAA GCAAGACTGG TTTGAACTAG ACACACCGAT TACGGGTGGC GATATGGCTA AAAACATCAA GAAAGTCCGT GCAGATGGAG AGCTAATTAA AACTTTCGGC TCTCTCAGTG ATATGGCTAA AGCCTACTCT AGCTCTATTC CTATCCGTTC AACAGGTATT GGATGGTGTA CCAATGATGA TGAATGTAAG TGCGGTAAGC CCGATAGCTG CGAGAGCGGA ATTGTAGATA AACGGCATCT TCCCTACTGG GAGGGGATGC TTGTTCAGCA AATAAAACTT ATGCAGTTGG ATGATATAGG GGAAGCAGGT AGAGATGCAG CTAGGAAAGG TATGGAACGC TGTGAAAAGG TATTGAGTGC TTTAGGTATC GATGTTGAAG CCATGAAGCA GAAGTTTAGC CAAAGAGATC TAATCGAGGT AGAGAATGTC TAA
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Protein sequence | MSLIELILTD VEFAEQQCSK PNQSTLERAI DGTLTGIVTY VKLANGHYQV YSRYEEELWK FPAAKGTKGT TKSNLTLNFG TINNPEMKQM AKWVIWNKLK EGLAVNSLLH SLSSLKGYFK WALSSDTTAT HGLTAFTSSA YVKYVNRLSA KRNGEIKPLS LTTKTLKFLA VENLYQCCKA FYFVKEHPWP GSGANMQAGL IGEAAQKAKT KPKTPIIPNE VLIPLCKFTK SCLDRADEIL ASKGKRESLL LRDSCIFWLL LTTGMRIHEV LGIKRGAYRS ETRDEVTYYY IETASEKTHT GLAEWIAPEI ATQAIDILGR YSAPLQKQLE NDLSKARDSQ DHVEVNRLEQ ISDHICLSVS KKSNAISLLS GCTITVHRLP NLCQQIDCNW NLSAHQFRRT FANYAVHSEL GDLRALKDHF KHWSITMTAL YAFNEDLDAE LFEELLREKY LIEEEIKQDW FELDTPITGG DMAKNIKKVR ADGELIKTFG SLSDMAKAYS SSIPIRSTGI GWCTNDDECK CGKPDSCESG IVDKRHLPYW EGMLVQQIKL MQLDDIGEAG RDAARKGMER CEKVLSALGI DVEAMKQKFS QRDLIEVENV
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