| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3430 |
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| Symbol | |
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| ID | 4280330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4082268 |
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| End bp | 4083860 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136249 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_752103 |
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| Protein GI | 114564589 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTAATT TATACCATAC ACGTTTGCAC AAGCTCGATG ATGTGAACAA CTACAGCTTA
CTGACGAATA TTCAACGTGG TATAGAAAAA GAGGGGCTGA GAGTCACGCC ACTGGCCAAG
CTTGCACAAA CTAGCCACCC CAAAGCACTT GGCTCTGCGT TAACTCATGG CAGCATCACG
ACCGATTATT CCGAGGCATT GCTCGAGTTT ATCACCCCGG TATTCAAGCA GGTAGATGAT
TGCATCGACT ATCTGGAACT GCTGCATCGT TTTACACAGA GTAATATTGG TGAGGAGTAT
TTGTGGCCGT CCAGTATGCC CTGTCGTCTA GAGGGGGAAA ACAGTATTCC CATCGCCAAA
TACGGGCATT CGAATTTGGG TCAGATGAAA CATATCTACA GGCAGGGATT GGCACATCGG
TATGGGCGAA TTATGCAGTC GATAGCGGGA GTTCATTATA ACTTCTCCAT GCCGGAAGCG
TTTTGGCCTC TTGCCCAAAC CCTTTGGGGT GATCTGGGTG AGTTGCAAGC ATTTAGATCG
GAGCGCTACT TTGGTCTGAT ACGCAACTTT CATCGTCACT CCTGGTTGTT AAGTTACCTG
TTCGGCGCCT CTCCGGTGCT CGATACTAGT TTTGTAGCCG ACAAACCCCA TAATTTAAAT
CTGATTGGCG AGCATACCTT GGGTCTGCCT TTTGCCACCT CATTACGCAT GAGCGATCTT
GGCTATAAGA GTGAGGCACA GGCTTCGATA AAGGTTAGCC TGAATAATTT AGACACTTAT
CTCGACAATC TGGATCAGGC TATCCATAAG AGTTACCCGG CTTATGAGCA GATCGGTATC
CAAGTTAATG GGGAATATCG CCAACTAAAC ACCAATATCT TACAAATTGA AAACGAGTAC
TACAGCGATA TTCGTCCAAA ATGCGTGATG AGCCCCGGAG AGAAGCCGAA TCAAGTGTTA
AAAGAGCGTG GCGTCGAATA TATCGAAGTG CGCGTTTTGG ACATCAACCC TTTCTTACCG
CTAGGCATCG ATGCACTGCA AATCCGTTTT CTGGATACAT TTTTGCTCTT CTGCCTGCTG
TCCGACAGCC CCGAGATCAC TGCGATCGAA GATGAAGAAA TAAAGACTAA CCTGCGGCTG
GTGATAGAGG AAGGACGAAA GCCTTCATTG ATCTTGCAAA ACGCTGGGGA GCCGATTGCT
TTTCAACAAA TGGCTCGGCA ACTACTGGAT GAGCTTATAC CTGTCGCAGA GCTACTGGAT
AAAGCCCATA AAGTTAGTTC TTTAAATGGA GAATCAGGTG AAACTCAGGA ATATCGCGAT
GCCATTTCGG CTCAACAAGA CAAGATATTG CAAAGTTCAT TAACGCCATC GGCAAGAATT
ATGCAGTCGA TCACACAGGG GGAAGGCTTT ACTAAGCAGA TGTTGACTCA GGCGAAACAG
CATAAACAGC ATCTTAGCCA GCAGGCGTTA TCCGAATCTG AGAAAACCCT CTTTCAAAAT
CTGGCCCGAG AGTCATTGCA AAAGCAGCAA GCGTTAGAGC TAAATGAGGA AAATCCGTTT
GAACACTTTC TCAAGACTTA CTTTGTGGCG TAA
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| Protein sequence | MSNLYHTRLH KLDDVNNYSL LTNIQRGIEK EGLRVTPLAK LAQTSHPKAL GSALTHGSIT
TDYSEALLEF ITPVFKQVDD CIDYLELLHR FTQSNIGEEY LWPSSMPCRL EGENSIPIAK
YGHSNLGQMK HIYRQGLAHR YGRIMQSIAG VHYNFSMPEA FWPLAQTLWG DLGELQAFRS
ERYFGLIRNF HRHSWLLSYL FGASPVLDTS FVADKPHNLN LIGEHTLGLP FATSLRMSDL
GYKSEAQASI KVSLNNLDTY LDNLDQAIHK SYPAYEQIGI QVNGEYRQLN TNILQIENEY
YSDIRPKCVM SPGEKPNQVL KERGVEYIEV RVLDINPFLP LGIDALQIRF LDTFLLFCLL
SDSPEITAIE DEEIKTNLRL VIEEGRKPSL ILQNAGEPIA FQQMARQLLD ELIPVAELLD
KAHKVSSLNG ESGETQEYRD AISAQQDKIL QSSLTPSARI MQSITQGEGF TKQMLTQAKQ
HKQHLSQQAL SESEKTLFQN LARESLQKQQ ALELNEENPF EHFLKTYFVA
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